Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1475270 158 3e-33
seq922613 154 3e-32
seq1770947 116 8e-21
seq225474 116 8e-21
seq1718873 113 1e-19
seq523010 105 2e-17
seq555725 87.8 4e-12
>seq1475270
Length=306
Score = 158 bits (174), Expect = 3e-33
Identities = 149/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||||||||||| || || || | || | ||||||||| || |||||||| ||||| |
Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| | ||||||||||| || || |||||||||||||| || || || || ||||| ||||
Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| | ||||| ||| ||||| || ||||| || ||||||||||| | ||||| ||||
Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245
Query 104550 ATATCTGCAT 104559
| || |||||
Sbjct 246 AAATTTGCAT 255
>seq922613
Length=1439
Score = 154 bits (170), Expect = 3e-32
Identities = 148/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||||| ||||| |||||||| || || | || || || || ||||| ||||||||||
Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| || | ||||||||| ||||| ||||| ||||||||||| ||||| ||||| || || |
Sbjct 205 TAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCT 146
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| | || || ||||| || |||| |||||||||||| || || | || || ||||
Sbjct 145 CGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAA 86
Query 104550 ATATCTGCAT 104559
|||| |||||
Sbjct 85 ATATTTGCAT 76
>seq1770947
Length=686
Score = 116 bits (128), Expect = 8e-21
Identities = 127/166 (77%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 238591 TATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTACGAA 238650
|||||||||| || ||||||||| | || | ||| ||||||||| ||||||| || |
Sbjct 489 TATGGAATTCAGCTCAGATACAATTAGTCAAGGAAGGTAAAATGCATGGTTTCTTGCGCA 430
Query 238651 TGTATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCCAAAGGAAGCTCTTAGATATA 238710
|||||||||| ||||| |||||||| ||||| | ||||| | |||||| |||| |
Sbjct 429 TGTATTGGGCAAAAAAAATACTTGAGTGGACGAAGTCTCCTGAAGAAGCT-TTAGCCAAC 371
Query 238711 G-TATTTATCTGAACGATAAATACGAACTCGACGGTACGGATCCTA 238755
| ||||||| | || ||||||||| | || |||| |||||||
Sbjct 370 GCTATTTATTTAAATGATAAATACAGCATGGATGGTAGAGATCCTA 325
>seq225474
Length=4644
Score = 116 bits (128), Expect = 8e-21
Identities = 102/127 (80%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391
||| |||| |||||| || || || || | || |||||||||||||| || ||||| ||
Sbjct 604 TCCTCCTCGTAGCCTGAGGACAAGGTGGAGGGTTGATTCTTTCTGAATGTTGTAGTCTGA 663
Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451
|| |||||||| ||||| || ||||| || ||||| || | ||||||||| ||||||||
Sbjct 664 AAGTGTTCTACCATCTTCCAGCTGTTTACCGGCAAAGATCAACCTCTGTTGGTCAGGAGG 723
Query 104452 TATTCCT 104458
||||||
Sbjct 724 AATTCCT 730
>seq1718873
Length=527
Score = 113 bits (124), Expect = 1e-19
Identities = 162/223 (73%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 165224 GGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATATTAATAAACCTTTA 165283
|| || ||| |||| ||||| || ||||| | ||||| ||| |||| | ||| || ||
Sbjct 411 GGAATATGTGATAATTTGTTGACATGTATTGCGAGAGCATGGGATATGAGTAAGCCATTT 352
Query 165284 CTTTTCTGTCCAGCTATGAATACACTTATGTGGGAACATCCTATTACTGAGCAGCATATA 165343
| || |||||||| |||||||| | |||||||| |||||| | || | ||||| |||
Sbjct 351 TTGTTTTGTCCAGCGATGAATACTCGAATGTGGGATCATCCTTTCACAGGACAGCAAATA 292
Query 165344 GAAACTCTTAA-GCATATGGGGTACATAGAAGTTGAGTGTATTGAGAAAAAGCTAGCT-T 165401
| | |||| | | |||| |||||||||||| |||| | || |||| | | | |
Sbjct 291 -ACTGTGTTAAAGAACCTGGGATACATAGAAGTTCCTTGTA-TCAGTAAAACATTGATGT 234
Query 165402 GTGGTGATATTGGAAAAGGTGCCATGGCAGAAGTTACTGATAT 165444
|||| || | ||| ||| |||||||| ||||| |||||||
Sbjct 233 GTGGAGACACTGGTTTAGGAGCCATGGCTGAAGTACCTGATAT 191
>seq523010
Length=1989
Score = 105 bits (116), Expect = 2e-17
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
|||||||||| || || ||||||| || | ||| ||||| | || ||||||||||| |
Sbjct 121 CTTTCTGAATGTTGTAATCAGATAATGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGA 62
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| | |||||| ||||| ||||| || ||||| || || || || |||||||| |||||||
Sbjct 61 TCAACCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTTGCTTTGACATTTT 2
Query 104490 C 104490
|
Sbjct 1 C 1
>seq555725
Length=2460
Score = 87.8 bits (96), Expect = 4e-12
Identities = 189/278 (68%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553
|||||||| ||| |||| ||| | |||| ||| || | |||||||| || |
Sbjct 1639 TGGTGGTACTATTTCTCCAAATTGTTGGAATTTTCAGACACATTTTTCTTCATACTCAGG 1580
Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTT--ACTT 78611
|| ||| || ||| | | ||||| || || || || || | || ||||| |||
Sbjct 1579 AAAAAAGAGAAACAACTGACATTTCTTCACGTGTACCACCACTCGACCATGTTCTCACTC 1520
Query 78612 TGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAGCGTTTCTAGGAGCTGAAATAA 78671
||| ||||| || ||||||||| | | | ||| | |||||||| ||| | |
Sbjct 1519 TGG--TGGATCGGCATTAAATGGGTGCCGAGTGGATCAACGTTTCTACCAGCGATGGTTA 1462
Query 78672 ATTCATTCGTACACGTTATTATGTATACTTATTACGGTATTGCTGCATGCGGCCCTACAT 78731
|||| ||| | || || ||||||| ||||||||||| | ||||| | || ||| |||
Sbjct 1461 ATTCTTTCATCCATGTACTTATGTACTCTTATTACGGTCTAGCTGCCTTAGGTCCT-CAT 1403
Query 78732 TTCG-TAAGTATTTGTGGTGGAAGAGATATCTTACTAT 78768
| | ||||| | |||||||||| ||| | |||||
Sbjct 1402 ATAGCCAAGTACCTTTGGTGGAAGAAATACTTGACTAT 1365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1124505222472964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |