Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1813012 89.7 6e-13
seq340977 89.7 6e-13
seq1682337 82.4 9e-11
>seq1813012
Length=1200
Score = 89.7 bits (98), Expect = 6e-13
Identities = 148/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560
|||| || || ||| | |||||||||||| | ||| ||||| || || |||||||
Sbjct 442 TAGGTTGCAAGCATGTCAAAGGAATTTTACTCTTTGGTCCTCCAGGAACAGGGAAAACAT 383
Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATGG 164618
| |||||||| |||| || |||| | | || || ||||||||| || ||
Sbjct 382 TGATGGCTCGTCAAATTGGCAAAATGCTTAATGCTAGAGAACC--TAAAATTGTAAACGG 325
Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678
|| || | || |||||||||| || || |||||||| ||||| ||| | |||
Sbjct 324 ACCACAAATTTTAGACAAATATGTGGGAGAATCAGAAGCAAATGTACGAAGACTCTTTGC 265
Query 164679 GGAGGCTGAAGAAGAACAAAAGAAAGCAGGTT 164710
|| |||||||||||| | || |||| | |||
Sbjct 264 AGATGCTGAAGAAGAAGAGAAAAAAGTAAGTT 233
>seq340977
Length=2472
Score = 89.7 bits (98), Expect = 6e-13
Identities = 143/206 (69%), Gaps = 12/206 (6%)
Strand=Plus/Plus
Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGG------TG-- 164773
|| ||| ||||| |||||||||| || ||||| | ||||| | | || ||
Sbjct 552 TTGCATATTATTATTTTTGATGAAATTGATGCCATCTGCAAGAGTAGAGGATCTGTTGGA 611
Query 164774 ----ATAATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829
||| | | | ||||| | ||||| |||||| | ||| | || || ||||||||
Sbjct 612 GGCAATACTGGTGTACATGACACTGTGGTGAATCAGCTACTTGCAAAGATTGATGGTGTT 671
Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889
||| || |||||||||||| || | |||||||| ||| || ||| | |||||||||
Sbjct 672 GAACAGTTGAATAATATTTTAGTTATTGGTATGACTAACAGAAAGGATATGATTGATGAT 731
Query 164890 GCTTTATTACGACCTGGTCGATTAGA 164915
|| || | |||||||| | || ||
Sbjct 732 GCCTTGATGAGACCTGGTAGGTTGGA 757
>seq1682337
Length=465
Score = 82.4 bits (90), Expect = 9e-11
Identities = 121/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATA 7122
|||||||||||| ||||| ||| | || ||||| |||||||| ||||| ||| |||
Sbjct 270 GGATTCCAAGCACACATTATAATCCTCCTGTCATTAGGATTTGTCTTTAACGTTGAAATA 329
Query 7123 ATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACA-ATTTATATAATT 7181
| | | |||||| || | || || ||| ||| | || | ||| | ||||||
Sbjct 330 ACATTCTTTAATTGGTCGACGCCTTGGCCTGAATAGTCAGCA-AACATGTCCTTATAATC 388
Query 7182 AGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230
||||| |||||||||| || || ||||| | ||||| ||||| |||
Sbjct 389 TGCTCCGTAATGTCTCCACTGGAAGCCATACACTGGACCCAAATCTCCT 437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582293693422800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |