Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1813012 89.7 6e-13 seq340977 89.7 6e-13 seq1682337 82.4 9e-11 >seq1813012 Length=1200 Score = 89.7 bits (98), Expect = 6e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 |||| || || ||| | |||||||||||| | ||| ||||| || || ||||||| Sbjct 442 TAGGTTGCAAGCATGTCAAAGGAATTTTACTCTTTGGTCCTCCAGGAACAGGGAAAACAT 383 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATGG 164618 | |||||||| |||| || |||| | | || || ||||||||| || || Sbjct 382 TGATGGCTCGTCAAATTGGCAAAATGCTTAATGCTAGAGAACC--TAAAATTGTAAACGG 325 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || || | || |||||||||| || || |||||||| ||||| ||| | ||| Sbjct 324 ACCACAAATTTTAGACAAATATGTGGGAGAATCAGAAGCAAATGTACGAAGACTCTTTGC 265 Query 164679 GGAGGCTGAAGAAGAACAAAAGAAAGCAGGTT 164710 || |||||||||||| | || |||| | ||| Sbjct 264 AGATGCTGAAGAAGAAGAGAAAAAAGTAAGTT 233 >seq340977 Length=2472 Score = 89.7 bits (98), Expect = 6e-13 Identities = 143/206 (69%), Gaps = 12/206 (6%) Strand=Plus/Plus Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGG------TG-- 164773 || ||| ||||| |||||||||| || ||||| | ||||| | | || || Sbjct 552 TTGCATATTATTATTTTTGATGAAATTGATGCCATCTGCAAGAGTAGAGGATCTGTTGGA 611 Query 164774 ----ATAATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829 ||| | | | ||||| | ||||| |||||| | ||| | || || |||||||| Sbjct 612 GGCAATACTGGTGTACATGACACTGTGGTGAATCAGCTACTTGCAAAGATTGATGGTGTT 671 Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889 ||| || |||||||||||| || | |||||||| ||| || ||| | ||||||||| Sbjct 672 GAACAGTTGAATAATATTTTAGTTATTGGTATGACTAACAGAAAGGATATGATTGATGAT 731 Query 164890 GCTTTATTACGACCTGGTCGATTAGA 164915 || || | |||||||| | || || Sbjct 732 GCCTTGATGAGACCTGGTAGGTTGGA 757 >seq1682337 Length=465 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATA 7122 |||||||||||| ||||| ||| | || ||||| |||||||| ||||| ||| ||| Sbjct 270 GGATTCCAAGCACACATTATAATCCTCCTGTCATTAGGATTTGTCTTTAACGTTGAAATA 329 Query 7123 ATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACA-ATTTATATAATT 7181 | | | |||||| || | || || ||| ||| | || | ||| | |||||| Sbjct 330 ACATTCTTTAATTGGTCGACGCCTTGGCCTGAATAGTCAGCA-AACATGTCCTTATAATC 388 Query 7182 AGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 ||||| |||||||||| || || ||||| | ||||| ||||| ||| Sbjct 389 TGCTCCGTAATGTCTCCACTGGAAGCCATACACTGGACCCAAATCTCCT 437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582293693422800