Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1475270 100 2e-16 seq523010 84.2 2e-11 >seq1475270 Length=306 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||||||||| |||| || ||||| || |||||||| ||||| |||||||| Sbjct 101 TCTTCAAGCTGTTTTCCCGCAAATATCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTA 160 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| ||||| ||| | | ||| || | | || || || | ||||| Sbjct 161 TCTTGGATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCTACTTCGAGTGTGATC 220 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | |||||||||||| || ||||| Sbjct 221 GTCTTACCAGTCAAAGTTTTCACAAAAATTTGCAT 255 >seq523010 Length=1989 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||| ||||| ||||||| || || ||||||||||||||||| ||||| || Sbjct 87 ATCTTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATGCCTTCCTT 28 Query 94912 GTCATAAATTTTTGCCTTGAC 94932 ||| | |||||||| ||||| Sbjct 27 GTCTTGGATTTTTGCTTTGAC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438075859541880