Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_006637.1 Length=14489 Score E Sequences producing significant alignments: (Bits) Value seq1020615 114 1e-21 >seq1020615 Length=641 Score = 114 bits (126), Expect = 1e-21 Identities = 166/230 (72%), Gaps = 17/230 (7%) Strand=Plus/Minus Query 5633 ACAAACT-TCAATGTGATCCACAGATTCGG-TAAAA-TCTGGCGCCAAGTTCCGTTCAAA 5689 |||| || ||| | | | |||||||||| | ||| | | |||||||| |||| ||||||| Sbjct 351 ACAACCTATCATTCTTACCCACAGATTCAGATAAGAGTTTGGCGCCATGTTCAGTTCAAA 292 Query 5690 TCC-----GTTGTCAACGGAGCGCCAGACTACCGACT--------GTGTTTACTGTAAGC 5736 || ||||| |||||| || ||||| ||| | |||| ||| |||| | Sbjct 291 TCAAATCTGTTGTAAACGGATCGTCAGACGGCCGTTTATGAGTATGTGTATACCGTAAAC 232 Query 5737 AGAACGGTATTTTGAGGTTGCAAAATTTTATTTAATTCTACGGTACttttttttCCTAAA 5796 ||||| ||||||||||||||||||| ||| ||||||| ||| | ||||| || | || Sbjct 231 AGAACAGTATTTTGAGGTTGCAAAA-TTTGTTTAATTTATCGGAATTTTTTGTTATTCAA 173 Query 5797 TTGTGTATTATAACAGTAATTCATACTTTATTTTACTGTTATTAATTAAT 5846 | | | ||||| |||| || ||| || | |||||| |||| || ||| Sbjct 172 TGATATTATATAATAGTAGTTTATATCTTGTATTACTGATATTTATCAAT 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 45271607238308