Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_006640.1 Length=5032 Score E Sequences producing significant alignments: (Bits) Value seq1020615 100 9e-18 >seq1020615 Length=641 Score = 100 bits (110), Expect = 9e-18 Identities = 135/187 (72%), Gaps = 16/187 (9%) Strand=Plus/Minus Query 120 CCACAGATTCGGT--AGAATCTGGCGCCAAGTTCCGTTCAAATCC-----GTTGTCAACG 172 |||||||||| | ||| | |||||||| |||| ||||||||| ||||| |||| Sbjct 333 CCACAGATTCAGATAAGAGTTTGGCGCCATGTTCAGTTCAAATCAAATCTGTTGTAAACG 274 Query 173 GAGCGCCAGACTACCGACT--------GTGTTTACTGTAAGCAGAACGGTATTTTGAGGT 224 || || ||||| ||| | |||| ||| |||| |||||| |||||||||||| Sbjct 273 GATCGTCAGACGGCCGTTTATGAGTATGTGTATACCGTAAACAGAACAGTATTTTGAGGT 214 Query 225 TGCAAAATTTTATTTAATTCTACGGTACTTTGTTTTCCTAAATTGTATATTATAACAGTA 284 ||||||| ||| ||||||| ||| | ||| | || | ||| ||| ||||| |||| Sbjct 213 TGCAAAA-TTTGTTTAATTTATCGGAATTTTTTGTTATTCAATGATATTATATAATAGTA 155 Query 285 ATTCATA 291 || ||| Sbjct 154 GTTTATA 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15671569388215