Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq600196 86.0 6e-13 seq779069 80.6 3e-11 >seq600196 Length=1129 Score = 86.0 bits (94), Expect = 6e-13 Identities = 73/89 (82%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 1433 AAAAACTGCGTCGATTGCCGCCAACCGCGTGAAAATCGGTTCATTTATTCAAAAGTTATT 1492 ||||||||| ||||||||||| || ||| | ||||| |||| ||| ||||||||||| | Sbjct 1125 AAAAACTGCATCGATTGCCGCAAATCGC-TAAAAATTGGTTGATTCATTCAAAAGTTTTG 1067 Query 1493 GCCGTTTGAAAATTCAAAAAATTGTGTCT 1521 || ||| ||| ||| |||||| |||||| Sbjct 1066 GCAGTTCTAAATTTCCAAAAATAGTGTCT 1038 Score = 80.6 bits (88), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 15714 AAAACTGCGTCGAATGGCACCAACCGCGTGGAAATTGGTTGATCCATTCAAAAGTTATTG 15773 |||||||| |||| || | | || ||| | |||||||||||| |||||||||||| | | Sbjct 1124 AAAACTGCATCGATTGCCGCAAATCGC-TAAAAATTGGTTGATTCATTCAAAAGTTTTGG 1066 Query 15774 CGGTTTGAAAATTCCAAAAATAGTGT 15799 | ||| ||| ||||||||||||||| Sbjct 1065 CAGTTCTAAATTTCCAAAAATAGTGT 1040 >seq779069 Length=1410 Score = 80.6 bits (88), Expect = 3e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 83 AAAATCGGGAAGTTATTGTTCTCACCCCATTTTACAAAAATCGAGTTTTCATCAGATCTC 142 ||||||||| |||||||| | ||||||| || | | |||||||||| ||||| ||||||| Sbjct 69 AAAATCGGGCAGTTATTGGTTTCACCCCGTTCTTCTAAAATCGAGTATTCATAAGATCTC 10 Query 143 GACGTTT 149 ||||||| Sbjct 9 GACGTTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49876455192938