Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_006648.1 Length=15158 Score E Sequences producing significant alignments: (Bits) Value seq1020615 120 3e-23 >seq1020615 Length=641 Score = 120 bits (132), Expect = 3e-23 Identities = 161/223 (72%), Gaps = 16/223 (7%) Strand=Plus/Minus Query 9847 ATGATTGTAATCCACAGATTCGGT--AGAATCTGGCGCCAAGTTCCGTTCAAATCC---- 9900 || ||| | | |||||||||| | ||| | |||||||| |||| ||||||||| Sbjct 344 ATCATTCTTACCCACAGATTCAGATAAGAGTTTGGCGCCATGTTCAGTTCAAATCAAATC 285 Query 9901 -GTTGTCAACGGAGCGCCAGACTACCGACT--------GTGTTTACTGTAAGCAGAACGG 9951 ||||| |||||| || ||||| ||| | |||| ||| |||| |||||| | Sbjct 284 TGTTGTAAACGGATCGTCAGACGGCCGTTTATGAGTATGTGTATACCGTAAACAGAACAG 225 Query 9952 TATTTTGAGGTGGCAAAATTTTATTTAATTTTACGGTACttttttttCCTAAATTGTATA 10011 ||||||||||| |||||| ||| |||||||| ||| | ||||| || | ||| ||| Sbjct 224 TATTTTGAGGTTGCAAAA-TTTGTTTAATTTATCGGAATTTTTTGTTATTCAATGATATT 166 Query 10012 TTATAACAGTAATTTATACTTTATTTGACTGTTATTAATTAAT 10054 ||||| |||| |||||| || | | |||| |||| || ||| Sbjct 165 ATATAATAGTAGTTTATATCTTGTATTACTGATATTTATCAAT 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47367282940109