Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq849147 100 3e-16
seq630901 100 3e-16
>seq849147
Length=1753
Score = 100 bits (110), Expect = 3e-16
Identities = 111/148 (75%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121
||||||| ||||| ||||| | ||||||| ||| | || || || || || | ||
Sbjct 333 TCCATCCATAAAAGTGCATCGAAGACAGTTTGGCGTAATTAGGTTCAGCAATGTGTACAT 392
Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181
||| ||| || || |||||||| ||||| ||||| || ||||| |||| || || |
Sbjct 393 TCAAAGACTGCGACTGGTCGATGAAAGCTCCTCTGTCGGCGGCCATCTTTAAAATTGTTT 452
Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATA 62209
|||||| ||||||||||| ||||||||
Sbjct 453 TTTGTGAAATTTCCCAAACTGTTTTATA 480
>seq630901
Length=3269
Score = 100 bits (110), Expect = 3e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
||||| | ||| |||||||| | |||||||| || ||||| ||||| |||||||||| |
Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 33897
|||||||||| ||||| || || || | ||||||||| |||| |||
Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACAAATCTTCTTGGGTTT 1070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608751923056280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |