Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1682337 113 1e-19 seq973369 96.9 9e-15 >seq1682337 Length=465 Score = 113 bits (124), Expect = 1e-19 Identities = 173/245 (71%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 111579 GATCAATTACAGAATGTCATTGATCAAATT--AAGAACAACCCAACTTCTCGTCGCATTA 111636 || |||||| ||||||| ||| |||| | |||| || || | | | | |||| Sbjct 346 GACCAATTAAAGAATGTTATT--TCAACGTTAAAGACAAATCCTAATGACAGGAGGATTA 289 Query 111637 TTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTA 111696 | ||| |||| ||||| || | ||| |||||||| || || || |||||| Sbjct 288 TAATGTGTGCTTGGAATCCTGTAGACTTGCCTAAAATGGCTCTCCCTCCCTGTCATTGCC 229 Query 111697 TGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTG 111756 | |||||| | |||| ||||| ||||| ||||| ||||||| ||||||||| Sbjct 228 TCGTCCAGTTCTTTGTAGCAGACGGAGAACTTTCGTGCCAGTTGTATCAAAGATCTGCTG 169 Query 111757 ATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCG 111816 | || |||||||||||||| || ||||||||||| || || || ||||| | | | || | Sbjct 168 ACATGGGTCTTGGTGTTCCATTCAATATTGCAAGCTATGCTCTTCTTACATACATGATAG 109 Query 111817 CTCAT 111821 ||||| Sbjct 108 CTCAT 104 >seq973369 Length=1003 Score = 96.9 bits (106), Expect = 9e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 364663 TGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAG 364722 |||||||| || || | | || |||| |||||| | ||| ||| | || || Sbjct 556 TGGAATGTGACACCTACAGACCTATGGGACTGGGCAAAACTAAAAGCCAGCATTGCCAAA 615 Query 364723 CATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATC 364782 ||||| || ||||| || | ||| || ||||| || || ||||| || || ||| Sbjct 616 CATGGAGTGCGTAACTCACTTCTACTAGCTCCAATGCCAACAGCGTCTACAGCGCAAATC 675 Query 364783 CTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTT 364842 || ||||||||||| | || ||||| | ||| |||| |||| ||||| |||| ||| Sbjct 676 CTAGGAAACAACGAATCGTTTGAACCTTACACATCCAATATTTACTCACGAAGGGTGCTT 735 Query 364843 TCCGGAGAATTTCCGGTA 364860 || |||||||||| |||| Sbjct 736 TCTGGAGAATTTCAGGTA 753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1272911209472706