Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq630901 111 2e-19 seq849147 105 8e-18 seq699280 98.7 1e-15 >seq630901 Length=3269 Score = 111 bits (122), Expect = 2e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206 ||||| | ||| |||||||| | |||||||| || ||||| ||||| |||||||| | | Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022 Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255 |||||||||||||||| ||| ||||| | ||||||||| |||| |||| Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACAAATCTTCTTGGGTTTT 1071 >seq849147 Length=1753 Score = 105 bits (116), Expect = 8e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 ||||||| ||||| ||||| | ||||||| ||| | || || || || || | || Sbjct 333 TCCATCCATAAAAGTGCATCGAAGACAGTTTGGCGTAATTAGGTTCAGCAATGTGTACAT 392 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || || |||||||| ||||| ||||| || ||||| |||| ||| || | Sbjct 393 TCAAAGACTGCGACTGGTCGATGAAAGCTCCTCTGTCGGCGGCCATCTTTAAAATTGTTT 452 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATA 62064 |||||| ||||||||||| |||||||| Sbjct 453 TTTGTGAAATTTCCCAAACTGTTTTATA 480 >seq699280 Length=1455 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 |||| | | ||| ||||| || || |||||||||||||| | || || || || | || Sbjct 953 AGTTGCGGAATTGAATAACGTCGGTGAAGCGTGAGTAAAATACTTCTCGGATAGCAAGTT 1012 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 |||||| || | || || || ||||| | |||||| || || || || | ||| || Sbjct 1013 GTACGTTTCCACGGCAGAATCGATATCTTCTCCATGAATGCCCACAGCCACTCTCATCAA 1072 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 |||||| || |||| ||| |||| || ||| || ||||| | ||| ||| |||||| Sbjct 1073 CATGTGTTGGGGTCGTTCGACGACTTTACCGTTGATCTTCAATAGGTACGATCTTTCCAG 1132 Query 63646 AGTTTTAAAACCAAAAT 63662 || | || | ||||| Sbjct 1133 CGTCTAAACAGTAAAAT 1149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619193245446800