Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq630901 111 2e-19
seq849147 105 8e-18
seq699280 98.7 1e-15
>seq630901
Length=3269
Score = 111 bits (122), Expect = 2e-19
Identities = 90/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206
||||| | ||| |||||||| | |||||||| || ||||| ||||| |||||||| | |
Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022
Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255
|||||||||||||||| ||| ||||| | ||||||||| |||| ||||
Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACAAATCTTCTTGGGTTTT 1071
>seq849147
Length=1753
Score = 105 bits (116), Expect = 8e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
||||||| ||||| ||||| | ||||||| ||| | || || || || || | ||
Sbjct 333 TCCATCCATAAAAGTGCATCGAAGACAGTTTGGCGTAATTAGGTTCAGCAATGTGTACAT 392
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
||| ||| || || |||||||| ||||| ||||| || ||||| |||| ||| || |
Sbjct 393 TCAAAGACTGCGACTGGTCGATGAAAGCTCCTCTGTCGGCGGCCATCTTTAAAATTGTTT 452
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATA 62064
|||||| ||||||||||| ||||||||
Sbjct 453 TTTGTGAAATTTCCCAAACTGTTTTATA 480
>seq699280
Length=1455
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525
|||| | | ||| ||||| || || |||||||||||||| | || || || || | ||
Sbjct 953 AGTTGCGGAATTGAATAACGTCGGTGAAGCGTGAGTAAAATACTTCTCGGATAGCAAGTT 1012
Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585
|||||| || | || || || ||||| | |||||| || || || || | ||| ||
Sbjct 1013 GTACGTTTCCACGGCAGAATCGATATCTTCTCCATGAATGCCCACAGCCACTCTCATCAA 1072
Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645
|||||| || |||| ||| |||| || ||| || ||||| | ||| ||| ||||||
Sbjct 1073 CATGTGTTGGGGTCGTTCGACGACTTTACCGTTGATCTTCAATAGGTACGATCTTTCCAG 1132
Query 63646 AGTTTTAAAACCAAAAT 63662
|| | || | |||||
Sbjct 1133 CGTCTAAACAGTAAAAT 1149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 619193245446800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |