Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1475270 122 7e-23 seq922613 109 5e-19 seq225474 89.7 4e-13 >seq1475270 Length=306 Score = 122 bits (134), Expect = 7e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || |||||||| ||||| | |||||| ||||||| ||| | || Sbjct 255 ATGCAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCA 196 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || ||||| || | ||| |||||| || |||||||| |||||||| || ||| Sbjct 195 GATACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 136 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||| || ||||| | ||||| | ||| || || ||||||||| Sbjct 135 CAGAGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTACCTTGTCAGATTACAAT 76 Query 25179 ATTCAAAAAG 25188 ||||| |||| Sbjct 75 ATTCAGAAAG 66 >seq922613 Length=1439 Score = 109 bits (120), Expect = 5e-19 Identities = 142/194 (73%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||||||||| || || | || ||| | |||||||| | || Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| |||| || ||| || ||||| || || || || || Sbjct 136 GACACTATCGAGAACGTCA---AAGC-CAAGATCCAGGATAAAGAGGGAATCCCTCCAGA 191 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||| |||||||||| || ||||| | || |||| ||||| | || || Sbjct 192 TCAACAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTA 251 Query 25175 CAATATTCAAAAAG 25188 |||||| || |||| Sbjct 252 CAATATCCAGAAAG 265 >seq225474 Length=4644 Score = 89.7 bits (98), Expect = 4e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| |||||||||||| || | || |||||||| ||||| | ||||||| | | Sbjct 730 AGGAATTCCTCCTGACCAACAGAGGTTGATCTTTGCCGGTAAACAGCTGGAAGATGGTAG 671 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || | || ||||| ||||| |||||||| || || || | || || |||||| | Sbjct 670 AACACTTTCAGACTACAACATTCAGAAAGAATCAACCCTCCACCTTGTCCTCAGGCTACG 611 Query 25220 AGGAGGA 25226 ||||||| Sbjct 610 AGGAGGA 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423700489525145