Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1475270 122 7e-23
seq922613 109 5e-19
seq225474 89.7 4e-13
>seq1475270
Length=306
Score = 122 bits (134), Expect = 7e-23
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || |||||||| ||||| | |||||| ||||||| ||| | ||
Sbjct 255 ATGCAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCA 196
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||||| || | ||| |||||| || |||||||| |||||||| || |||
Sbjct 195 GATACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 136
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | | || ||||| || ||||| | ||||| | ||| || || |||||||||
Sbjct 135 CAGAGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTACCTTGTCAGATTACAAT 76
Query 25179 ATTCAAAAAG 25188
||||| ||||
Sbjct 75 ATTCAGAAAG 66
>seq922613
Length=1439
Score = 109 bits (120), Expect = 5e-19
Identities = 142/194 (73%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||||||||| || || | || ||| | |||||||| | ||
Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||||||||| |||| |||| || ||| || ||||| || || || || ||
Sbjct 136 GACACTATCGAGAACGTCA---AAGC-CAAGATCCAGGATAAAGAGGGAATCCCTCCAGA 191
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||||| |||||||||| || ||||| | || |||| ||||| | || ||
Sbjct 192 TCAACAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTA 251
Query 25175 CAATATTCAAAAAG 25188
|||||| || ||||
Sbjct 252 CAATATCCAGAAAG 265
>seq225474
Length=4644
Score = 89.7 bits (98), Expect = 4e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159
||| ||||| |||||||||||| || | || |||||||| ||||| | ||||||| | |
Sbjct 730 AGGAATTCCTCCTGACCAACAGAGGTTGATCTTTGCCGGTAAACAGCTGGAAGATGGTAG 671
Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219
|| | || ||||| ||||| |||||||| || || || | || || |||||| |
Sbjct 670 AACACTTTCAGACTACAACATTCAGAAAGAATCAACCCTCCACCTTGTCCTCAGGCTACG 611
Query 25220 AGGAGGA 25226
|||||||
Sbjct 610 AGGAGGA 604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423700489525145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |