Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1475270 113 4e-20 seq523010 86.0 5e-12 >seq1475270 Length=306 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||||| || ||||| ||| |||| || ||||| || | | Sbjct 255 ATGCAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCA 196 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || ||||| ||||| || || || |||||||| |||||| Sbjct 195 GATACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 136 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | |||||||| || |||||| | || || || ||| | || |||||||| Sbjct 135 CAGAGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTACCTTGTCAGATTACAAT 76 Query 22399 ATTCAAAAAG 22408 ||||| |||| Sbjct 75 ATTCAGAAAG 66 >seq523010 Length=1989 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 22292 ATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATAT 22351 || ||||| |||||| ||||||||||| || ||||| || ||||| || | | || | Sbjct 5 ATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATTCCTCCAGATCAGCAGAGGTTGATCT 64 Query 22352 TTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 |||| || || ||||| || ||| ||||| | || |||||||||||||| |||| Sbjct 65 TTGCTGGAAAGCAGTTGGAAGATGGTCGCACATTATCTGATTACAACATTCAGAAAG 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410402648957395