Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1475270 131 4e-25 seq922613 129 1e-24 >seq1475270 Length=306 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| || ||||| || || | | || || |||||||| | |||||||| || || | Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| | ||||||| ||| |||||||||||||| |||||||| || || ||||||| Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | |||| ||| | ||||||||||| ||||||||||| || |||| ||| || || | Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245 Query 288464 ATATCTGCAT 288473 | || ||||| Sbjct 246 AAATTTGCAT 255 >seq922613 Length=1439 Score = 129 bits (142), Expect = 1e-24 Identities = 145/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| |||||||| ||||| | || ||||| || || || | ||||| || || || | Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206 Query 288344 TCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 | |||||||||||| ||||| |||||| |||||||||||||| || ||||| |||| Sbjct 205 TAAGACGCTGTTGA---TCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGT 149 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || |||| || | ||| ||||| | || || ||||| || |||| |||||| | Sbjct 148 TCTCGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCA 89 Query 288461 CGAATATCTGCAT 288473 | ||||| ||||| Sbjct 88 CAAATATTTGCAT 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152101247937474