Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1475270 118 1e-21 seq973369 102 8e-17 seq523010 87.8 2e-12 >seq1475270 Length=306 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| ||||| |||||||||| | ||| || ||||||||||||| || || ||| | | Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||| || || || |||||||||||||| ||||| ||||| |||||| | Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | ||||| | || ||||| | || | ||||| || ||||||||||| || | Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245 Query 64434 AAATTTGCAT 64443 |||||||||| Sbjct 246 AAATTTGCAT 255 >seq973369 Length=1003 Score = 102 bits (112), Expect = 8e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 ||| | || || |||||||||||||| |||| ||||| ||||||| ||||| ||||| Sbjct 707 GTGTAAGGTTCAAACGATTCGTTGTTTCCTAGGATTTGCGCTGTAGACGCTGTTGGCATT 648 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 || | | | ||||| |||| || ||||| ||||||| ||||| | |||| Sbjct 647 GGAGCTAGTAGAAGTGAGTTACGCACTCCATGTTTGGCAATGCTGGCTTTTAGTTTTGCC 588 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTG 154234 || | ||| | || |||||| ||| ||||||||||||||||| Sbjct 587 CAGTCCCATAGGTCTGTAGGTGTCACATTCCACATGTCGTATTG 544 >seq523010 Length=1989 Score = 87.8 bits (96), Expect = 2e-12 Identities = 88/113 (78%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| |||||||||||||| | | ||||| | ||||| | |||||| || ||| | | Sbjct 121 CTTTCTGAATGTTGTAATCAGATAATGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGA 62 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 | | || |||||| || |||||||| ||||| || ||||| | |||||||||| Sbjct 61 TCAACCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGA-TTTTTGCTTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488259250294520