Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1803547 86.0 7e-12 seq1817640 82.4 9e-11 >seq1803547 Length=964 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 153910 TACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTC 153969 |||| || |||| || || || |||||||| ||||| || |||||||| |||||||||| Sbjct 366 TACAAACACGAGAACAACACATAAGGAGAGATAAAGCGACAAGTAACATTTGCACAGCTC 307 Query 153970 AGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019 ||||| | | |||||||| || | | ||||| | ||||||||| || Sbjct 306 AGGCATTATTAGCTAATATCTCAGCCATGTATGCTGTGTATCATGGTCCA 257 >seq1817640 Length=1473 Score = 82.4 bits (90), Expect = 9e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 154957 AGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGT 155016 |||| ||| | ||||||||||| | ||||| ||||| ||||| | || |||| | Sbjct 381 AGGTTTATTTGGATGGAGCAAACATGAATGCGCAGGTTGGACTCTGTAGGCCTGGTGATT 322 Query 155017 ATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTG 155076 |||| |||| || | || || ||| | || ||||| |||||||| || ||||| || | Sbjct 321 ATGGATCAGACGTTTCCCACCTTAACCTTCACAAAACCTTCTGTATACCTCATGGTGGCG 262 Query 155077 GAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||| ||||| | || || || || || Sbjct 261 GAGGGCCTGGAATGGGACCGATTGGAGT 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566014111402720