Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq922613 136 9e-27 seq1475270 134 3e-26 seq523010 87.8 4e-12 >seq922613 Length=1439 Score = 136 bits (150), Expect = 9e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || |||||||| || | ||| || | ||||| || ||||| || || || || | Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 |||| || ||||| |||||||| || || ||||| || || || || |||||||||| Sbjct 205 TAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCT 146 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | || ||||| || ||||||||| | |||| ||||||||||||||||| || || | Sbjct 145 CGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAA 86 Query 195131 ACACTTGCAT 195140 | | |||||| Sbjct 85 ATATTTGCAT 76 >seq1475270 Length=306 Score = 134 bits (148), Expect = 3e-26 Identities = 146/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATC-GGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009 |||| |||||||||||||| | |||| || | || ||||| ||||| || || || || Sbjct 66 CTTTCTGAATATTGTAATCTGACAAG-GTACGACCGTCTTCAAGCTGTTTTCCCGCAAAT 124 Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069 || | || ||||| ||||| ||||| |||||||| ||||| ||||| ||| ||||| Sbjct 125 ATCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTT 184 Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 ||||| || || ||| || ||||| || || | |||||| || ||||||||||| || Sbjct 185 TCAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACA 244 Query 195130 AACACTTGCAT 195140 || | |||||| Sbjct 245 AAAATTTGCAT 255 >seq523010 Length=1989 Score = 87.8 bits (96), Expect = 4e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| ||||| |||||||| | | || | |||||||| | |||||| || || |||| Sbjct 121 CTTTCTGAATGTTGTAATCAGATAATGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGA 62 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | | || || ||||||||||||||||| |||||||| |||||| ||||| || | Sbjct 61 TCAACCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTTGCTTTGACATTTT 2 Query 195071 C 195071 | Sbjct 1 C 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1083567471899961