Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1475270 95.1 9e-15 seq922613 82.4 6e-11 >seq1475270 Length=306 Score = 95.1 bits (104), Expect = 9e-15 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| |||||||||||||| || | | ||| |||| || | ||| || || ||||||| Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| || ||||||||| | |||| || || || || || || ||||| Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || ||||| | ||| || || | || ||||| || || ||||||||||| |||| Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245 Query 48757 AAATCTGCAT 48766 |||| ||||| Sbjct 246 AAATTTGCAT 255 >seq922613 Length=1439 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || |||||||| ||||| || | || | || || | ||| || || ||||| | Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | || ||||||||||| | || | ||||| || || ||||| ||| || Sbjct 205 TAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCT 146 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || ||||| | ||||| || | ||||| || ||||| |||||||| || |||| Sbjct 145 CGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAA 86 Query 48757 AAATCTGCAT 48766 | || ||||| Sbjct 85 ATATTTGCAT 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 372474078754509