Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1475270 141 2e-28
seq922613 104 4e-17
seq158920 87.8 3e-12
>seq1475270
Length=306
Score = 141 bits (156), Expect = 2e-28
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
|||||| || || || || || | | || || | |||||||| ||||| || |||||
Sbjct 73 AATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATATCAATCT 132
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||||||||| || || ||||||||||||||||| ||||| | |||| ||| ||||||
Sbjct 133 CTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTTCAATAGT 192
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
||| |||| ||| ||||| || || || || ||||| || | ||||| ||||| |||||
Sbjct 193 ATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAAAAATTTG 252
Query 193358 CAT 193360
|||
Sbjct 253 CAT 255
>seq922613
Length=1439
Score = 104 bits (114), Expect = 4e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
||||| ||||| || | || | ||| || | ||||| || |||||||| | | |
Sbjct 257 ATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATAAGACGC 198
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|||||||| ||||| ||||| |||||||| || || |||| ||| | || |||||
Sbjct 197 TGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCTCGATAGTG 138
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || | || ||||||| || ||||| || ||||| | || || ||||||||||||
Sbjct 137 TCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAAATATTTGC 78
Query 193359 AT 193360
||
Sbjct 77 AT 76
>seq158920
Length=526
Score = 87.8 bits (96), Expect = 3e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 193259 TTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAG 193318
||| || ||||| ||||| | ||| | |||| |||||| || || | |||||| || ||
Sbjct 1 TTCCTTGTCTTGGATTTTTGCTTTGACATTTTCAATAGTGTCTGATGGCTCAACCTCGAG 60
Query 193319 AGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
||||||||||| || || || ||||| ||||| |||||||| |||
Sbjct 61 GGTTATAGTTTTGCCAGTGAGAGTTTTCACAAAAATTTGCATCTTA 106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 879153716536560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |