Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1475270 134 2e-26 seq922613 107 3e-18 >seq1475270 Length=306 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| |||||||| || || || ||| | ||||| || ||| Sbjct 255 ATGCAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCA 196 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| |||||| || |||||| |||||||||||||| || || ||||| ||| Sbjct 195 GATACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 136 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || || ||||| ||||| | || || |||||||| ||| Sbjct 135 CAGAGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTACCTTGTCAGATTACAAT 76 Query 156003 AT 156004 || Sbjct 75 AT 74 >seq922613 Length=1439 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || ||||| ||||| ||||||||||||||||| ||| || Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| ||| || || || |||||||| || || |||||||| ||| Sbjct 136 GACACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAA 195 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | |||| ||| || || ||||| || ||| | | || | || || || ||| Sbjct 196 CAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAAT 255 Query 156003 AT 156004 || Sbjct 256 AT 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715194622322800