Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1475270 140 6e-28 seq523010 95.1 2e-14 >seq1475270 Length=306 Score = 140 bits (154), Expect = 6e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| ||||| || || || || | || || | ||||| || ||||| || |||||| Sbjct 74 ATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATATCAATCTC 133 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| ||||| ||||||||||||||||| |||||| ||||| || |||| | Sbjct 134 TGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTTCAATAGTA 193 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| | |||||||| || || || || |||||||| || ||||| | ||| || ||| Sbjct 194 TCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAAAAATTTGC 253 Query 192535 AT 192536 || Sbjct 254 AT 255 >seq523010 Length=1989 Score = 95.1 bits (104), Expect = 2e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || |||||||||||||| || |||| ||||| || || ||||||||||| || ||| Sbjct 113 ATGTTGTAATCAGATAATGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATCAACCTC 54 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464 || ||||| || || || ||||| || ||||| ||||| ||| ||||| Sbjct 53 TGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTTGCTTTGACATT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 961485530482050