Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1475270 141 2e-28 seq922613 87.8 3e-12 >seq1475270 Length=306 Score = 141 bits (156), Expect = 2e-28 Identities = 141/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| |||||||| || | || |||| || | ||||| || ||||| || ||||| Sbjct 73 AATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATATCAATCT 132 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||| || ||||| ||||||||||||||||| |||||| ||||| || ||||| Sbjct 133 CTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTTCAATAGT 192 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| | |||||||| || || || || |||||||| || ||||| | || || || Sbjct 193 ATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAAAAATTTG 252 Query 172067 CAT 172069 ||| Sbjct 253 CAT 255 >seq922613 Length=1439 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| ||||||||||| | | |||||| || || || ||||| |||||||| || || Sbjct 221 TGTTTCCCAGCAAAAATAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATC 162 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || ||| || || ||||| ||||| | ||| ||||||| ||||| || || || Sbjct 161 TTGGCTTTGACGTTCTCGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCT 102 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || || || || | ||||| ||||| Sbjct 101 GTCAAAGTCTTCACAAATATTTGCAT 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 884510405741400