Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1648874 125 6e-24
seq922613 82.4 6e-11
>seq1648874
Length=424
Score = 125 bits (138), Expect = 6e-24
Identities = 186/261 (71%), Gaps = 2/261 (1%)
Strand=Plus/Minus
Query 34225 GTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAACCGCATGCTTTGCAGCCCTGA 34284
|||||||| || || ||| | || | ||| | | ||||| |||||||| || |||
Sbjct 424 GTGTTGAGTTTGTGGTTGAATTCAAGTGGGCCATAGAAGCCGCAAGCTTTGCAACCTTGA 365
Query 34285 CAGATAATGTTCTTT-TTAGCGGACACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGG 34343
|| | | |||| || || ||| || || | ||||| || |||||||| | ||
Sbjct 364 TGAATGGT-TCCTTTCTTGGCACTCACAATCAGGTTTGTCTCTGGATTGTCACAACCTGG 306
Query 34344 ACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTG 34403
|||||||||||||| || || || ||||| || ||||| ||||| ||| | || ||
Sbjct 305 GCACAACACAAACTTACGAATAAATCCATCCAGAAGGTCTTGTAATTTAGAAGCATCATG 246
Query 34404 GGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTC 34463
|| ||||| ||||||||||| ||||| || | || | ||| ||||| || || |||||
Sbjct 245 TGAACCGTTCACGATGAATCGGTCGTTCTTAAAGTCAAACTGGGTTTGAGCACCTAGCTC 186
Query 34464 GCACCCGAAGTACTTTGTCGG 34484
|| || || || ||||| ||
Sbjct 185 ACAGCCAAAATATTTTGTTGG 165
>seq922613
Length=1439
Score = 82.4 bits (90), Expect = 6e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||||||||| || ||||| || || || || ||||| | ||| ||| ||
Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || ||| ||||| || ||||| || | || ||||||
Sbjct 136 GACACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAA 195
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | ||||||| ||| || |||||||| ||||||| | | ||| | | || |||||
Sbjct 196 CAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAAT 255
Query 110453 ATTCAAAAAG 110462
|| || ||||
Sbjct 256 ATCCAGAAAG 265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403669248274619
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |