Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1648874 125 6e-24 seq922613 82.4 6e-11 >seq1648874 Length=424 Score = 125 bits (138), Expect = 6e-24 Identities = 186/261 (71%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 34225 GTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAACCGCATGCTTTGCAGCCCTGA 34284 |||||||| || || ||| | || | ||| | | ||||| |||||||| || ||| Sbjct 424 GTGTTGAGTTTGTGGTTGAATTCAAGTGGGCCATAGAAGCCGCAAGCTTTGCAACCTTGA 365 Query 34285 CAGATAATGTTCTTT-TTAGCGGACACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGG 34343 || | | |||| || || ||| || || | ||||| || |||||||| | || Sbjct 364 TGAATGGT-TCCTTTCTTGGCACTCACAATCAGGTTTGTCTCTGGATTGTCACAACCTGG 306 Query 34344 ACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTG 34403 |||||||||||||| || || || ||||| || ||||| ||||| ||| | || || Sbjct 305 GCACAACACAAACTTACGAATAAATCCATCCAGAAGGTCTTGTAATTTAGAAGCATCATG 246 Query 34404 GGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTC 34463 || ||||| ||||||||||| ||||| || | || | ||| ||||| || || ||||| Sbjct 245 TGAACCGTTCACGATGAATCGGTCGTTCTTAAAGTCAAACTGGGTTTGAGCACCTAGCTC 186 Query 34464 GCACCCGAAGTACTTTGTCGG 34484 || || || || ||||| || Sbjct 185 ACAGCCAAAATATTTTGTTGG 165 >seq922613 Length=1439 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || ||||| || || || || ||||| | ||| ||| || Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || ||| ||||| || ||||| || | || |||||| Sbjct 136 GACACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAA 195 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||||| ||| || |||||||| ||||||| | | ||| | | || ||||| Sbjct 196 CAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAAT 255 Query 110453 ATTCAAAAAG 110462 || || |||| Sbjct 256 ATCCAGAAAG 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403669248274619