Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1475270 163 5e-35 seq922613 145 1e-29 seq523010 111 3e-19 seq225474 84.2 4e-11 >seq1475270 Length=306 Score = 163 bits (180), Expect = 5e-35 Identities = 150/190 (79%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| ||||| ||||| || | | | ||||||||| || |||||||| ||||| | Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | ||| ||||||||||| || |||||||| |||||||| || || || ||||| |||| Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| ||||| ||| |||||||| | || |||||||| || ||||| || || |||| Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245 Query 82801 ATATCTGCAT 82810 | || ||||| Sbjct 246 AAATTTGCAT 255 >seq922613 Length=1439 Score = 145 bits (160), Expect = 1e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| ||||| || ||||| || | | || || || || ||||| |||||||| | Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | || | |||||||||||||| ||||| || ||||| || ||||| ||||| || || | Sbjct 205 TAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCT 146 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || || || ||||| ||||| || || || ||||| |||||||| ||||| |||| Sbjct 145 CGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAA 86 Query 82801 ATATCTGCAT 82810 |||| ||||| Sbjct 85 ATATTTGCAT 76 >seq523010 Length=1989 Score = 111 bits (122), Expect = 3e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || || |||||||||| | | ||| ||||| | || ||||||||||||| Sbjct 121 CTTTCTGAATGTTGTAATCAGATAATGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGA 62 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | || || ||||||||||| || |||||||| ||||| || |||||||| ||||||| Sbjct 61 TCAACCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTTGCTTTGACATTTT 2 Query 82741 C 82741 | Sbjct 1 C 1 >seq225474 Length=4644 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || | ||| || || ||||||||||| || || || || || || ||||||| ||| Sbjct 620 AGGACAAGGTGGAGGGTTGATTCTTTCTGAATGTTGTAGTCTGAAAGTGTTCTACCATCT 679 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCT 82709 || || ||||| || |||||||| | || ||||| || ||||| |||||| Sbjct 680 TCCAGCTGTTTACCGGCAAAGATCAACCTCTGTTGGTCAGGAGGAATTCCT 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 958894691851237