Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1475270 109 5e-19 seq699280 93.3 4e-14 >seq1475270 Length=306 Score = 109 bits (120), Expect = 5e-19 Identities = 144/193 (75%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 134524 CCTTT-TGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAA 134581 ||||| ||||| ||||| || | ||| ||| || ||| || |||||||| || ||||| Sbjct 65 CCTTTCTGAATATTGTAATCTGACAA-GGTACGACCGTCTTCAAGCTGTTTTCCCGCAAA 123 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 ||||| | ||| ||||| || || || |||||||| ||||| ||||| || || | Sbjct 124 TATCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTAC-GT 182 Query 134642 GTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 | |||| || || || | || || ||||| || || || ||||| || |||||||| | Sbjct 183 TTTCAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCA 242 Query 134701 CGAAAATTTGCAT 134713 | ||||||||||| Sbjct 243 CAAAAATTTGCAT 255 >seq699280 Length=1455 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 ||| | ||||| |||||||| || || |||||| ||||||||| || || | ||| Sbjct 1120 TACCTATTGAAGATCAACGGTAAAGTCGTCGAACGACCCCAACACATGTTGATGAGAGTG 1061 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 || ||||||||||| || ||||| || || | ||| ||||||||||| | || | || Sbjct 1060 GCTGTGGGCATTCATGGAGAAGATATCGATTCTGCCGTGGAAACGTACAACTTGCTATCC 1001 Query 7645 TTGAAACAGTTTACGCACGCTTCGCCCAC 7673 ||| | ||||| |||||||| || || Sbjct 1000 GAGAAGTATTTTACTCACGCTTCACCGAC 972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493881741357160