Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq340977 131 1e-25
seq630901 100 2e-16
seq1682337 96.9 3e-15
seq1813012 93.3 3e-14
>seq340977
Length=2472
Score = 131 bits (144), Expect = 1e-25
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 19531 TTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAG 19590
||||||| || ||| |||||| ||||| || | |||||| | || || ||||| |||
Sbjct 534 TTAGGGCCTAATAGTGGTTTGCATATTATTATTTTTGATGAAATTGATGCCATCTGCAAG 593
Query 19591 CAAAGAGGTTCTGGTGTA------AATGGAGTACATGACACTGTTGTCAATCAACTCCTG 19644
||||| |||| || | | ||| |||||||||||||| || ||||| || ||
Sbjct 594 AGTAGAGGATCTGTTGGAGGCAATACTGGTGTACATGACACTGTGGTGAATCAGCTACTT 653
Query 19645 TCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGA 19704
|||| | || |||||| | || |||||||||||||||||||||| |||||||| |||
Sbjct 654 GCAAAGATTGATGGTGTTGAACAGTTGAATAATATTTTAGTTATTGGTATGACTAACAGA 713
Query 19705 CTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGA 19748
||| | || || ||||| | |||| ||| |||||||
Sbjct 714 AAGGATATGATTGATGATGCCTTGATGAGACCTGGTAGGTTGGA 757
>seq630901
Length=3269
Score = 100 bits (110), Expect = 2e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| || ||||| ||| ||||||||||||| ||||| ||||| || || || ||
Sbjct 1060 AGATTTGTTGTATTTCCTATTGAATATCATGACATCTGGCACATGTATAAGAAGGCTGAG 1001
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAA 43794
|| || |||||||| ||||||||||||||| || ||||
Sbjct 1000 GCTTCTTTTTGGACTGCAGAAGAAGTTGATCTGTCTAA 963
>seq1682337
Length=465
Score = 96.9 bits (106), Expect = 3e-15
Identities = 227/340 (67%), Gaps = 2/340 (1%)
Strand=Plus/Minus
Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924
||| ||| | ||||| || ||||| || |||| | |||||| |||||| | ||| |
Sbjct 437 AGGAGATTTGGGTCCAGTGTATGGCTTCCAGTGGAGACATTACGGAGCAGATTATAAGGA 378
Query 40925 TATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGAT 40984
|||| |||| ||| | |||| | || |||||| || ||||| ||| |
Sbjct 377 CATGTTTGCTGACTATTCAGGCCAAGGCGTCGACCAATTAAAGAATGTTATTTCAACGTT 318
Query 40985 TAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACA 41044
|| | |||| || | | | || ||| |||| || ||||| || ||| | |
Sbjct 317 AAAGACAAATCCTAATGACAGGAGGATTATAATGTGTGCTTGGAATCCTGTAGACTTGCC 258
Query 41045 TTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA-ATGGTGAAC 41103
| ||||| | || || ||||||| | ||||| | || ||| | || ||||
Sbjct 257 TAAAATGGCTCTCCCTCCCTGTCATTGCCTCGTCCAGTTCTTTGTA-GCAGACGGAGAAC 199
Query 41104 TGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAG 41163
| || || || |||||||||||||| | ||||||||| || || || || || || || |
Sbjct 198 TTTCGTGCCAGTTGTATCAAAGATCTGCTGACATGGGTCTTGGTGTTCCATTCAATATTG 139
Query 41164 CGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
| || |||||||| || || || ||||| || || || ||
Sbjct 138 CAAGCTATGCTCTTCTTACATACATGATAGCTCATGTCAC 99
>seq1813012
Length=1200
Score = 93.3 bits (102), Expect = 3e-14
Identities = 142/201 (71%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 19330 GGATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTA 19389
|| || || ||||| ||| |||| || | ||| || || || || ||||||||
Sbjct 440 GGTTGCAAGCATGTCAAAGGAATTTTACTCTTTGGTCCTCCAGGAACAGGGAAAACATTG 381
Query 19390 ATTGCGAGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGT 19446
|| || | || || | ||| | |||| | | | ||||| ||||||||||| ||
Sbjct 380 ATGGCTCGTCAAATTGGCAAAATGCTTAATGCTAGAGAACCT---AAAATTGTAAACGGA 324
Query 19447 CCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCT 19506
|| |||| ||| | |||||||| || |||| |||| |||||||||| | | |||||
Sbjct 323 CCACAAATTTTAGACAAATATGTGGGAGAATCAGAAGCAAATGTACGAAGACTCTTTGCA 264
Query 19507 GACGCTGAAGAAGAACAAAAA 19527
|| |||||||||||| | |||
Sbjct 263 GATGCTGAAGAAGAAGAGAAA 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 388625479462915
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |