Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq922613 116 4e-21 seq1475270 98.7 1e-15 >seq922613 Length=1439 Score = 116 bits (128), Expect = 4e-21 Identities = 143/194 (74%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| | || || ||||||||||| | || || || || Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || ||||| || |||||||| |||||||| || Sbjct 136 GACACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAA 195 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| || || || ||||||| || || || | ||||| ||| Sbjct 196 CAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAAT 255 Query 27586 GTCCA-AAAGGAAT 27598 |||| ||||| || Sbjct 256 ATCCAGAAAGGTAT 269 >seq1475270 Length=306 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || ||||| || || || || || ||| | Sbjct 255 ATGCAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCA 196 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||||||||| || || || || |||||||| ||||| || Sbjct 195 GATACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 136 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || || || || || || | ||||||| | |||| || ||| Sbjct 135 CAGAGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTACCTTGTCAGATTACAAT 76 Query 27586 GTCCA-AAAGG 27595 | || ||||| Sbjct 75 ATTCAGAAAGG 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557314572950960