Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq555725 86.0 7e-12 >seq555725 Length=2460 Score = 86.0 bits (94), Expect = 7e-12 Identities = 172/255 (67%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 32703 GAATATCTAGATACTATTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTG 32762 |||| | ||| || ||||||||||| | || || ||| || ||| | | ||| | Sbjct 1612 GAATTTTCAGACACATTTTTCTTCATACTCAGGAAAAAAGAGAAACAACTGACATTTCTT 1553 Query 32763 CACGTATACCACCATTTTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCA 32822 ||||| |||||||| | |||||||| | | | ||||| || ||||||||| | | Sbjct 1552 CACGTGTACCACCACTCGACCATGTTCTCACTCTGGTGGATCGGCATTAAATGGGTGCCG 1493 Query 32823 GGAGGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGT 32882 | ||| | ||| | ||| | | |||||||| || ||||| | ||||| | Sbjct 1492 AGTGGATCAACGTTTCTACCAGCGATGGTTAATTCTTTCATCCATGTACTTATGTACTCT 1433 Query 32883 TATTACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATAT 32942 |||||||| || | || |||||||| | || || || |||||||| ||||| Sbjct 1432 TATTACGGTCTAGCTGCCTTAGGTCCTCATATAGCCAAGTACCTTTGGTGGAAGAAATAC 1373 Query 32943 TTAACTATCATACAA 32957 || ||||| ||||| Sbjct 1372 TTGACTATGTTACAA 1358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589435945695920