Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_028853.1 Length=50078 Score E Sequences producing significant alignments: (Bits) Value seq1583616 178 4e-40 seq1583541 152 2e-32 >seq1583616 Length=367 Score = 178 bits (196), Expect = 4e-40 Identities = 233/323 (72%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 38912 TTCGTTTTCGTATGCTCTATGTCATTTATCGCTAAATAAAGCTCATAATCGTGATTTTCT 38971 || ||| | | ||| || |||| | || | |||||||||| |||| ||||||||||| Sbjct 14 TTAGTTCTTGAATGATCAATGTTTTCAATTCCCAAATAAAGCTGATAAGCGTGATTTTCT 73 Query 38972 ACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGG 39031 || ||||||||||| | ||||| || || | || || || | || | | ||| Sbjct 74 GGTTTACCACAATATTCTGTACCTCGATCCGTGAGAATTCGCAATAAAGGAATATTTTGT 133 Query 39032 CTTTCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTC 39091 | ||||| | |||| |||| ||||||| |||| || |||| | | ||||| ||||| Sbjct 134 CCATCAAAAAACGGTATCACTCTATCATTTAGCAAGTCAGCAGAAGTAATAGCTGTCTTA 193 Query 39092 ATTGTATAAAGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAA 39151 | |||||| || |||||||| ||| | || ||||||||||| || || || ||| Sbjct 194 TCTACATAAAGCTTAGCAAACGCTACTCTCGAATATGTATCAATAAAAGTCTGCTGGTAA 253 Query 39152 ATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCA 39211 || | | || || |||| ||||| |||||| |||||||||| || || | ||| || Sbjct 254 ATGAGCACAACACCCTTGATATTGCCTACATAGTAAGTATCTTGAGATCCCAAATAACCT 313 Query 39212 GGGTGTACCGTTTCAATTTCACC 39234 |||||| | || ||||||||||| Sbjct 314 GGGTGTTCTGTGTCAATTTCACC 336 >seq1583541 Length=367 Score = 152 bits (168), Expect = 2e-32 Identities = 209/292 (72%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 38943 CTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAG 39002 |||| || | | |||| ||||||| ||| |||||||| ||||| | || |||| Sbjct 323 CTAAGTATAATTGATAAGCGTGATTCTCTGGTTTGCCACAGTATTCGGTACCCATATCAG 264 Query 39003 TTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCA 39062 | || ||||| || | |||| ||| | |||||| |||||| ||| ||||||| | Sbjct 263 TCAAAATGCGCAATAATGGTACGTTTTGTCCATCAAAGAATGGTATTACTCTATCATTAA 204 Query 39063 GCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTAC 39122 | | ||| || ||| | || || || || ||||||||| ||||| | || ||| | Sbjct 203 GAAGATCTGCTGCAGTAATTGCAGTTTTGTCTGTATAAAGCTTTGCCATAGCAACTCTTG 144 Query 39123 TGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACAT 39182 || ||||||||||| ||||| |||||||| || || || || |||| || || || | Sbjct 143 AATAGGTATCAATAAAGGTTTGCTGATAAATTCGTCCAACACCCTTGATATTTCCTACGT 84 Query 39183 AGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCACC 39234 | ||||||| || || || | ||| ||||||||| | || |||||||| || Sbjct 83 AATAAGTATCCTGAGAACCTAAATAACCAGGGTGTTCTGTATCAATTTCCCC 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156661561365840