Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq1583616 178 3e-40 seq1583541 159 8e-35 >seq1583616 Length=367 Score = 178 bits (196), Expect = 3e-40 Identities = 217/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794 ||| | |||||||||| |||| ||||||||||| || ||||||||||| | ||||| Sbjct 41 ATTCCCAAATAAAGCTGATAAGCGTGATTTTCTGGTTTACCACAATATTCTGTACCTCGA 100 Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCA 24854 || || | || || || | || | | ||| | ||||| | |||| |||| ||||| Sbjct 101 TCCGTGAGAATTCGCAATAAAGGAATATTTTGTCCATCAAAAAACGGTATCACTCTATCA 160 Query 24855 TTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACT 24914 || |||| || |||| | | ||||| ||||| | |||||| || |||||||| ||| Sbjct 161 TTTAGCAAGTCAGCAGAAGTAATAGCTGTCTTATCTACATAAAGCTTAGCAAACGCTACT 220 Query 24915 TTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCC 24974 | || ||||||||||| || || || ||||| | | || || |||| ||||| Sbjct 221 CTCGAATATGTATCAATAAAAGTCTGCTGGTAAATGAGCACAACACCCTTGATATTGCCT 280 Query 24975 ACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACC 25030 |||||| |||||||||| || || | ||| || |||||| | || ||||||||||| Sbjct 281 ACATAGTAAGTATCTTGAGATCCCAAATAACCTGGGTGTTCTGTGTCAATTTCACC 336 >seq1583541 Length=367 Score = 159 bits (176), Expect = 8e-35 Identities = 222/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 24720 TGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAA 24779 || ||||||| | ||| |||| || | | |||| ||||||| ||| |||||||| Sbjct 342 TGATCAATATTTTCGATTCCTAAGTATAATTGATAAGCGTGATTCTCTGGTTTGCCACAG 283 Query 24780 TATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTAT 24839 ||||| | || ||||| || ||||| || | |||| ||| | |||||| || Sbjct 282 TATTCGGTACCCATATCAGTCAAAATGCGCAATAATGGTACGTTTTGTCCATCAAAGAAT 223 Query 24840 GGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGT 24899 |||| ||| ||||||| || | ||| || ||| | || || || || ||||||||| Sbjct 222 GGTATTACTCTATCATTAAGAAGATCTGCTGCAGTAATTGCAGTTTTGTCTGTATAAAGC 163 Query 24900 TTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACT 24959 ||||| | || ||| | || ||||||||||| ||||| |||||||| || || || Sbjct 162 TTTGCCATAGCAACTCTTGAATAGGTATCAATAAAGGTTTGCTGATAAATTCGTCCAACA 103 Query 24960 CCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTT 25019 || |||| || || || || ||||||| || || || | ||| ||||||||| | || Sbjct 102 CCCTTGATATTTCCTACGTAATAAGTATCCTGAGAACCTAAATAACCAGGGTGTTCTGTA 43 Query 25020 TCAATTTCACC 25030 |||||||| || Sbjct 42 TCAATTTCCCC 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111848340154996