Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1682337 138 1e-27 >seq1682337 Length=465 Score = 138 bits (152), Expect = 1e-27 Identities = 232/336 (69%), Gaps = 0/336 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||||||||| |||||||| || || ||||| || || ||||| ||||| || || || | Sbjct 101 GACATGAGCTATCATGTATGTAAGAAGAGCATAGCTTGCAATATTGAATGGAACACCAAG 160 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| | |||| |||||| | |||||| || || || || | || || |||| Sbjct 161 ACCCATGTCAGCAGATCTTTGATACAACTGGCACGAAAGTTCTCCGTCTGCTACAAAGAA 220 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||| |||| || || || ||||| ||||| ||| | || || ||||| || Sbjct 221 CTGGACGAGGCAATGACAGGGAGGGAGAGCCATTTTAGGCAAGTCTACAGGATTCCAAGC 280 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAG 6855 ||||| | ||||| ||||||| ||| || ||| || || || || | || | Sbjct 281 ACACATTATAATCCTCCTGTCATTAGGATTTGTCTTTAACGTTGAAATAACATTCTTTAA 340 Query 6856 CTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTG 6915 ||||| | || || || |||||||| || | || ||| || || || | || Sbjct 341 TTGGTCGACGCCTTGGCCTGAATAGTCAGCAAACATGTCCTTATAATCTGCTCCGTAATG 400 Query 6916 TCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 |||||||||||| || || || || ||||| || || Sbjct 401 TCTCCACTGGAAGCCATACACTGGACCCAAATCTCC 436 Score = 138 bits (152), Expect = 1e-27 Identities = 232/336 (69%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || || ||||| || || || || |||||||||||||| | || || || ||| || Sbjct 436 GGAGATTTGGGTCCAGTGTATGGCTTCCAGTGGAGACATTACGGAGCAGATTATAAGGAC 377 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 | || |||||||| || || || | ||||| | || | || || || || Sbjct 376 ATGTTTGCTGACTATTCAGGCCAAGGCGTCGACCAATTAAAGAATGTTATTTCAACGTTA 317 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 ||| || ||| ||||||| ||||| | ||||| || ||||| || || | ||| Sbjct 316 AAGACAAATCCTAATGACAGGAGGATTATAATGTGTGCTTGGAATCCTGTAGACTTGCCT 257 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 ||||| ||||| || || || |||| ||| |||| || || | || || || Sbjct 256 AAAATGGCTCTCCCTCCCTGTCATTGCCTCGTCCAGTTCTTTGTAGCAGACGGAGAACTT 197 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 || |||||| | |||||| |||| | |||||||| | || || || ||||| ||||| Sbjct 196 TCGTGCCAGTTGTATCAAAGATCTGCTGACATGGGTCTTGGTGTTCCATTCAATATTGCA 137 Query 34694 AGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || || ||||| || || |||||||| ||||||||| Sbjct 136 AGCTATGCTCTTCTTACATACATGATAGCTCATGTC 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438047715815760