Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1682337 102 7e-17 >seq1682337 Length=465 Score = 102 bits (112), Expect = 7e-17 Identities = 226/334 (68%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 ||||| ||||||||||| | | | ||||| || | ||| || |||||||| |||||| Sbjct 105 TGAGCTATCATGTATGTAAGAAGAGCATAGCTTGCAATATTGAATGGAACACCAAGACCC 164 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGA 118665 ||||| || ||||| || ||||| ||||| || || || |||| ||| ||| | ||||| Sbjct 165 ATGTCAGCAGATCTTTGATACAACTGGCACGAAAGTTCTCCGTCTGCTACAAAGAACTGG 224 Query 118666 CTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGATTCCAGGCTGTT 118725 | | ||||| ||||| ||| |||| | || | |||||||||| || Sbjct 225 ACGAGGCAATGACAGGGAGGGAGAGCCATTTTAGGCAAGTCTACAGGATTCCAAGCACAC 284 Query 118726 AAAACATGCCTTCTGCTATATGGTTCTACCTGTATACCCTCAATTAA-ATTCTGAATCTG 118784 | | | ||| ||| || || | | || || || | || ||| ||||| | || Sbjct 285 ATTATAATCCTCCTGTCATTAGGATTTGTCTTTA-ACGTTGAAATAACATTCTTTAATTG 343 Query 118785 ATCCACACCCTTTCCAGTATACTGAGACTCGCAT-CCTTTATATTCTGCCCCAAAAAATC 118843 || || || | || | ||| | || | ||| | ||||| ||||| || || || Sbjct 344 GTCGACGCCTTGGCCTGAATAGTCAG-CAAACATGTCCTTATAATCTGCTCCGTAATGTC 402 Query 118844 TCCATTGAAAACCATAAACAGGCCCCAGATCTCC 118877 |||| || || ||||| || || |||| |||||| Sbjct 403 TCCACTGGAAGCCATACACTGGACCCAAATCTCC 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405268118046412