Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq922613 118 2e-21 seq225474 100 6e-16 seq1475270 91.5 3e-13 >seq922613 Length=1439 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| ||||| || || || | ||| || | ||||| || ||||| || || || || | Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 |||| || ||||| || ||||| | ||| || || ||||||||||| ||| ||||| | Sbjct 205 TAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCT 146 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 |||| ||||| || ||| || || | || || |||||||| || | |||||| |||| Sbjct 145 CGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAA 86 Query 211105 ACACCTGCAT 211114 | | ||||| Sbjct 85 ATATTTGCAT 76 >seq225474 Length=4644 Score = 100 bits (110), Expect = 6e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || || ||||||||||| || || || ||||| || ||||| || || | ||| || Sbjct 611 CGTAGCCTGAGGACAAGGTGGAGGGTTGATTCTTTCTGAATGTTGTAGTCTGAAAGTGTT 670 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||||||||| || || || ||||| | | |||||||||||||||| |||| Sbjct 671 CTACCATCTTCCAGCTGTTTACCGGCAAAGATCAACCTCTGTTGGTCAGGAGGAATTCCT 730 >seq1475270 Length=306 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| || || || ||||| | | ||| | || ||||| ||||| || || || || | Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | | ||||| || || |||| |||||| || || ||||| || || ||||||| Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | || || || || || || ||||| ||||||||||| || || | ||| || |||| Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245 Query 211105 ACACCTGCAT 211114 | | ||||| Sbjct 246 AAATTTGCAT 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1132077721872795