Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1475270 109 4e-19 >seq1475270 Length=306 Score = 109 bits (120), Expect = 4e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| | || || || |||||||| |||||||| || | | Sbjct 255 ATGCAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCA 196 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| |||| ||||| || |||||||| | || ||||||||| Sbjct 195 GATACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 136 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || |||||||| || ||||| || ||||||| || || || |||||||| Sbjct 135 CAGAGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTACCTTGTCAGATTACAAT 76 Query 23791 ATACAAAAAG 23800 || || |||| Sbjct 75 ATTCAGAAAG 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330499836115364