Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1475270 109 1e-18 seq927092 95.1 3e-14 seq1822978 91.5 3e-13 seq1372329 86.0 1e-11 seq225474 86.0 1e-11 >seq1475270 Length=306 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | ||||||||| | ||| || | || ||||| ||||| || || || || | Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || ||||| || || ||||| ||||| || |||||||| || ||| || || Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || || ||||| | || || || | ||||||||||| || ||||||||||| | | Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245 Query 225704 ACACTTGCAT 225713 | | |||||| Sbjct 246 AAATTTGCAT 255 >seq927092 Length=517 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 370679 TGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGATGGATCA 370738 || ||||||||||||||||||||||| || | || ||||| ||||| |||||| ||||| Sbjct 79 TGTCCAAAAAATCAGAATAAATGTTGGTATAAAATTGGATCCCCTCCACCTGATTGATCA 138 Query 370739 AAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||| ||||||| ||||| ||| ||||| Sbjct 139 AAAAATGAGGTATTAATATTTCGATCCGTTAA 170 >seq1822978 Length=11131 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 7545 TAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTT 7604 |||| ||| || || ||||| || ||||| | |||||| | | ||| | || ||| | Sbjct 7602 TAATTACCAGCTATATAACGTAATGATTACAGGGCATGCGGTAATAATGGTGTTTTTTAT 7543 Query 7605 TGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGC 7664 | ||||| | | || || || || || ||||| ||||| ||| | ||||||||||| Sbjct 7542 GATAATGCCAGCCTTAATGGGAGGATTTGGTAATTGGTTCGTACCTCTCATGATTGGTGC 7483 Query 7665 TCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATT 7709 || |||||||| ||||| | | || ||| |||||||||| || Sbjct 7482 ACCAGATATGGCATTTCCTCGTATGAATAATTTAAGTTTTTGGTT 7438 >seq1372329 Length=267 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 7553 AACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGC 7612 || |||| || || ||| | | | | ||| ||| |||| ||||||||| | ||||||| Sbjct 35 AAATTTATAATGTAATTGTAAGTTCACTTGCTTTTATTATAATTTTCTTTATAGTTATGC 94 Query 7613 CGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATA 7672 | |||| || || || || ||||||||||| |||| | || || ||||||||||||| Sbjct 95 CAATTATAATTGGTGGGTTAGGAAATTGATTAATTCCATGGATAATCGGTGCTCCTGATA 154 Query 7673 TGGCTTT 7679 | || || Sbjct 155 TAGCCTT 161 >seq225474 Length=4644 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || || |||||||||||||| || |||||||| || | ||||| || | | ||| Sbjct 611 CGTAGCCTGAGGACAAGGTGGAGGGTTGATTCTTTCTGAATGTTGTAGTCTGAAAGTGTT 670 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| ||||| || || || ||||| | | |||||||| || ||||| ||| Sbjct 671 CTACCATCTTCCAGCTGTTTACCGGCAAAGATCAACCTCTGTTGGTCAGGAGGAATTCCT 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1164677284910202