Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1475270 109 1e-18
seq927092 95.1 3e-14
seq1822978 91.5 3e-13
seq1372329 86.0 1e-11
seq225474 86.0 1e-11
>seq1475270
Length=306
Score = 109 bits (120), Expect = 1e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583
|||| || | ||||||||| | ||| || | || ||||| ||||| || || || || |
Sbjct 66 CTTTCTGAATATTGTAATCTGACAAGGTACGACCGTCTTCAAGCTGTTTTCCCGCAAATA 125
Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643
| | || ||||| || || ||||| ||||| || |||||||| || ||| || ||
Sbjct 126 TCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTTT 185
Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703
| || || ||||| | || || || | ||||||||||| || ||||||||||| | |
Sbjct 186 CAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACAA 245
Query 225704 ACACTTGCAT 225713
| | ||||||
Sbjct 246 AAATTTGCAT 255
>seq927092
Length=517
Score = 95.1 bits (104), Expect = 3e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 370679 TGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGATGGATCA 370738
|| ||||||||||||||||||||||| || | || ||||| ||||| |||||| |||||
Sbjct 79 TGTCCAAAAAATCAGAATAAATGTTGGTATAAAATTGGATCCCCTCCACCTGATTGATCA 138
Query 370739 AAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
||||| ||||||| ||||| ||| |||||
Sbjct 139 AAAAATGAGGTATTAATATTTCGATCCGTTAA 170
>seq1822978
Length=11131
Score = 91.5 bits (100), Expect = 3e-13
Identities = 119/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 7545 TAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTT 7604
|||| ||| || || ||||| || ||||| | |||||| | | ||| | || ||| |
Sbjct 7602 TAATTACCAGCTATATAACGTAATGATTACAGGGCATGCGGTAATAATGGTGTTTTTTAT 7543
Query 7605 TGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGC 7664
| ||||| | | || || || || || ||||| ||||| ||| | |||||||||||
Sbjct 7542 GATAATGCCAGCCTTAATGGGAGGATTTGGTAATTGGTTCGTACCTCTCATGATTGGTGC 7483
Query 7665 TCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATT 7709
|| |||||||| ||||| | | || ||| |||||||||| ||
Sbjct 7482 ACCAGATATGGCATTTCCTCGTATGAATAATTTAAGTTTTTGGTT 7438
>seq1372329
Length=267
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 7553 AACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGC 7612
|| |||| || || ||| | | | | ||| ||| |||| ||||||||| | |||||||
Sbjct 35 AAATTTATAATGTAATTGTAAGTTCACTTGCTTTTATTATAATTTTCTTTATAGTTATGC 94
Query 7613 CGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATA 7672
| |||| || || || || ||||||||||| |||| | || || |||||||||||||
Sbjct 95 CAATTATAATTGGTGGGTTAGGAAATTGATTAATTCCATGGATAATCGGTGCTCCTGATA 154
Query 7673 TGGCTTT 7679
| || ||
Sbjct 155 TAGCCTT 161
>seq225474
Length=4644
Score = 86.0 bits (94), Expect = 1e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || || |||||||||||||| || |||||||| || | ||||| || | | |||
Sbjct 611 CGTAGCCTGAGGACAAGGTGGAGGGTTGATTCTTTCTGAATGTTGTAGTCTGAAAGTGTT 670
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| |||||||| ||||| || || || ||||| | | |||||||| || ||||| |||
Sbjct 671 CTACCATCTTCCAGCTGTTTACCGGCAAAGATCAACCTCTGTTGGTCAGGAGGAATTCCT 730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1164677284910202
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |