Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq922613 167 5e-36 seq1475270 131 3e-25 seq1038852 87.8 4e-12 >seq922613 Length=1439 Score = 167 bits (184), Expect = 5e-36 Identities = 151/190 (79%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| ||||| |||||||||| ||| |||||||||||||| || |||||||| ||||| | Sbjct 265 CTTTCTGGATATTGTAGTCAGAAAGTGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAA 206 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 | | ||| ||||| || || || ||||| || || |||||||| ||||| ||| | | Sbjct 205 TAAGACGCTGTTGATCTGGAGGGATTCCCTCTTTATCCTGGATCTTGGCTTTGACGTTCT 146 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 |||||||||| || | ||| ||||| | || || ||||| || ||||||||||| || | Sbjct 145 CGATAGTGTCTGATGGTTCCACTTCTAATGTAATAGTCTTTCCTGTCAAAGTCTTCACAA 86 Query 283090 ATATCTGCAT 283099 |||| ||||| Sbjct 85 ATATTTGCAT 76 >seq1475270 Length=306 Score = 131 bits (144), Expect = 3e-25 Identities = 145/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 282910 CTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 |||| || || ||||| || | |||| || || || || || || ||||| || ||||| Sbjct 66 CTTTCTGAATATTGTAATCTGACAAG-GTACGACCGTCTTCAAGCTGTTTTCCCGCAAAT 124 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||| || ||||| || || || |||||||| || || |||||| | Sbjct 125 ATCAATCTCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTTACGTTT 184 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||| || |||| || |||||||| |||||||||||||| |||||||| || || Sbjct 185 TCAATAGTATCTGAAGGCTCTACTTCGAGTGTGATCGTCTTACCAGTCAAAGTTTTCACA 244 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 245 AAAATTTGCAT 255 >seq1038852 Length=774 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 273772 TCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAAC 273831 |||| | |||||||| || |||| ||| ||| |||||||| || || | || | | Sbjct 470 TCAGCATGGTGAAAATATATCTGGGACTGGCAGCATCCTTGCCGCCCTGTAATCTAGTGC 411 Query 273832 CAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCA 273891 |||||||||| |||| ||||| | || ||||||||||| || || || | || |||| Sbjct 410 CAAACTGACCAATGGGCTGTAGCAAATTGATGTTGTTGCTGCCAACATAGTTTTGCGCCA 351 Query 273892 TATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGA 273951 || | || || | | || || || ||||||||||| || |||||||| | Sbjct 350 AGTTAATAATGGTTGTCATTAACGACACTTCACCGTGGTGATAAGCTGATTGTTCGGCCA 291 Query 273952 TATAACCACTGAACTGAGCAACCTTCACATC 273982 ||||| |||||||| || || || || Sbjct 290 CTGAACCAGCCAACTGAGCTACTTTAACTTC 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1022290544234882