Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq922613 140 8e-28
seq1475270 102 2e-16
seq158920 89.7 1e-12
seq225474 87.8 4e-12
>seq922613
Length=1439
Score = 140 bits (154), Expect = 8e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| ||| | |||||||| || || || | || |||||| ||||||
Sbjct 79 CAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCAGAC 138
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||||||| ||||| ||||| ||||| ||||||||||| || || ||
Sbjct 139 ACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAACAG 198
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || || |||||||| || ||||| | || ||| | || || || ||
Sbjct 199 CGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAATATC 258
Query 178104 CAAAAAG 178110
|| ||||
Sbjct 259 CAGAAAG 265
>seq1475270
Length=306
Score = 102 bits (112), Expect = 2e-16
Identities = 137/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||||||| | || || || |||||||| ||||| || || |||||
Sbjct 252 CAAATTTTTGTGAAAACTTTGACTGGTAAGACGATCACACTCGAAGTAGAGCCTTCAGAT 193
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || || || || || ||||||||||| || || || || ||
Sbjct 192 ACTATTGAAAACGTAAAGGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAACAG 133
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || ||||||||||| ||||| || | || |||| | ||||| || |
Sbjct 132 AGATTGATATTTGCGGGAAAACAGCTTGAAGACGGTCGTAC-CTTGTCAGATTACAATAT 74
Query 178103 CCAAAAAG 178110
|| ||||
Sbjct 73 TCAGAAAG 66
>seq158920
Length=526
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||||||||| || ||||| || ||||||||||| || ||||||
Sbjct 99 CAAATTTTTGTGAAAACTCTCACTGGCAAAACTATAACCCTCGAGGTTGAGCCATCAGAC 40
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAA 178022
|| || || || |||||| ||| || || ||||| |||
Sbjct 39 ACTATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAA 1
>seq225474
Length=4644
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
|||||| ||||| ||||| || | | ||||| ||||| |||||||| |||||||| ||
Sbjct 730 AGGAATTCCTCCTGACCAACAGAGGTTGATCTTTGCCGGTAAACAGCTGGAAGATGGTAG 671
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||| | || || ||| | || ||||||||||| || || |||||
Sbjct 670 AACACTTTCAGACTACAACATTCAGAAAGAATCAACCCTCCACCTTGT 623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1175615686849702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |