Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq7333 109 4e-19 >seq7333 Length=2231 Score = 109 bits (120), Expect = 4e-19 Identities = 251/374 (67%), Gaps = 3/374 (1%) Strand=Plus/Plus Query 18948 TGGAATCCAAAGGATATCCCCTTAATGGTACTACCT-CCATGTCACA-CGTTATGTCAGT 19005 |||||||| |||| | ||| |||||| |||||| || |||||| | | || |||| Sbjct 1314 TGGAATCCTGTGGATTTACCCATAATGGCACTACCCACCCTGTCACTGCCTCGTG-CAGT 1372 Query 19006 TTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCC 19065 ||||||| || || || ||| | |||||||| | || || |||||| ||||||||| Sbjct 1373 TTTACGTGGCCAATGGGGAACTCTCCTGCCAGATGTATCAACGATCGGCAGATATGGGCT 1432 Query 19066 TTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTA 19125 | || || || ||||||||||| | || || ||||| || || | || || | | Sbjct 1433 TGGGTGTTCCATTCAACATTGCCAGCTACGCCCTTCTCACTCGAATCATCGCCCACATAA 1492 Query 19126 CAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATC 19185 | | || || | || ||||| | || || |||| ||||| ||| | || | |||| Sbjct 1493 CTGATCTCAAGCCTGGGGATTTTGTCCACACTCTGGGAGATGCTCATGTCTATCTAAATC 1552 Query 19186 ATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAA 19245 | | || || | |||| ||| || || |||||| || || || || || Sbjct 1553 ACGTTGAGCCTCTGAAAGAGCAACTCCTACGTCGCCCAAAGCCCTTCCCAACGCTCAAGT 1612 Query 19246 TTATTCGAAATGTAACAGATATAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGAT 19305 || ||| || || || || || | ||||| || | || |||||| ||| ||| | Sbjct 1613 TTTCTCGGAAGGTGACTGACATTGAGGACTTCAAGTTCGAGGATTTTGTGCTGAATGACT 1672 Query 19306 ATAATCCACACCCC 19319 | ||||| || ||| Sbjct 1673 ACAATCCCCATCCC 1686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398983869013170