Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7333 192 7e-44 >seq7333 Length=2231 Score = 192 bits (212), Expect = 7e-44 Identities = 492/737 (67%), Gaps = 9/737 (1%) Strand=Plus/Minus Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595 ||| || ||||||||||| | ||| | ||||| | |||| | | |||| |||| || Sbjct 1713 TTAAACTGCCATCTCCATCGCGATCTTGGGATGGGGATTGTAGTCATTCAGCACAAAATC 1654 Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGG 145655 ||| | ||||||| || ||||| |||| || | | ||||| | || ||||| Sbjct 1653 CTCGAACTTGAAGTCCTCAATGTCAGTCACCTTCCGAGAAAACTTGAGCGTTGGGAAGGG 1594 Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715 | |||| | || || ||||| ||||| ||||| || || ||||| || || Sbjct 1593 CTTTGGGCGACGTAGGAGTTGCTCTTTCAGAGGCTCAACGTGATTTAGATAGACATGAGC 1534 Query 145716 GTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA 145775 || ||||| ||||| || ||||| |||| ||| | || | |||||||| || Sbjct 1533 ATCTCCCAGAGTGTGGACAAAATCCCCAGGCTTGAGATCAGTTATGTGGGCGATGATTCG 1474 Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 || || |||| ||||||||| |||||||| || || |||| ||||| || |||| || Sbjct 1473 AGTGAGAAGGGCGTAGCTGGCAATGTTGAATGGAACACCCAAGCCCATATCTGCCGATCG 1414 Query 145836 CTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCAC-AGGAGGTGGC 145894 || |||| |||||||||||| ||||| |||||||| |||| |||| ||| ||| | Sbjct 1413 TTGATACATCTGGCAGGAGAGTTCCCCATTGGCCACGTAAAACT-GCACGAGGCAGTGAC 1355 Query 145895 AGGG-CGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTC 145953 |||| || || ||||| ||| | ||| | || ||||| ||| | | || | || | Sbjct 1354 AGGGTGGGTAGTGCCATTATGGGTAAATCCACAGGATTCCATGCGCTCATGATAATCCGC 1295 Query 145954 CTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTG 146012 | | || | || ||| | ||| | |||| ||| | ||||| ||||||||||| Sbjct 1294 C-GATCATTTGGCTTCTCCCGGATGCGCTGAATCACCTCCTTCAGCTGATCCACGCCCTG 1236 Query 146013 CCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACC 146071 || ||| | ||| | || | | || | ||| || ||||| | |||||| || | Sbjct 1235 TCCAACGTAGTTATCCTTACATGTGC-CATAGGGGGCTCCAAAGTGACGCCACTGAAAGC 1177 Query 146072 CGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGT 146131 | || || ||||||| || || ||| | | | | || | ||||| | Sbjct 1176 CATAAACTGGCCCCAAATCACCCTCCTCTCGCTCCGTGAATCCCATTGAATCCAGGAACT 1117 Query 146132 CCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC-GCGGAGAGCTCATTGGAGTCC 146190 ||| | | ||| | | ||||||| | | | || || | | || || | ||| Sbjct 1116 CCCTTGTACTGTTCCCATTCCAGATCCCAATGTTCTTCTGCTG-CAATTCCTTTGCGTCA 1058 Query 146191 GTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTG 146250 || || |||||||||||||||| || || || || || | ||| || || |||||| Sbjct 1057 GTTGAACCCCTGATGAACCAGATCAATTCCTCAGCTACACCTCGCCAAAACACTCTCTTG 998 Query 146251 GTGGTCAGCAGGGGGAA 146267 |||||||| || ||||| Sbjct 997 GTGGTCAGGAGCGGGAA 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589288855697040