Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq7333 179 3e-40 >seq7333 Length=2231 Score = 179 bits (198), Expect = 3e-40 Identities = 434/645 (67%), Gaps = 23/645 (4%) Strand=Plus/Minus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCG-CGTA--AGCTGCTCTGTGAGAGCATC 97052 |||||| || |||||||| ||| | || || |||| || |||||| | |||| || Sbjct 1614 AAACTTGAGCGTTGGGAAGGGCTTTGGG---CGACGTAGGAGTTGCTCTTTCAGAGGCTC 1558 Query 97053 AATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAA 97112 || |||||| | ||| | ||||||||||| | |||||| | ||| || ||||| | Sbjct 1557 AACGTGATTTAGATAGACATGAGCATCTCCCAGAGTGTGGACAAAATCCCCAGGCTTGAG 1498 Query 97113 ATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCAC 97172 |||||| | |||||||| || | ||| | || | ||||| |||||||| || || || Sbjct 1497 ATCAGTTATGTGGGCGATGATTCGAGTGAGAAGGGCGTAGCTGGCAATGTTGAATGGAAC 1438 Query 97173 CCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACAC 97232 || | |||||||| || |||| |||||| | ||| ||||| || | |||| ||| Sbjct 1437 ACCCAAGCCCATATCTGCCGATCGTTGATACATCTGGCAGGAGAGTTCCCCATTGGCCAC 1378 Query 97233 ATAAAACTGACTCAATACA-TGACAGGG-GGGCAACGCCATTTTTGGAACATCTAAGACA 97290 |||||||| | | | || |||||||| ||| | |||||| | || | ||| | | Sbjct 1377 GTAAAACTG-CACGAGGCAGTGACAGGGTGGGTAGTGCCATTATGGGTAAATCCACAGGA 1319 Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 ||||| || | ||| | || | | ||| |||| || | ||| | ||| | | Sbjct 1318 TTCCATGCGCTCATGATAATCCGCCGATCATTTGGCTTCTCCCGGATGCGCTGAATCACC 1259 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCT-TG--ATATTCT 97407 | ||| | ||||| ||||| | |||| | || || | ||| || | || ||| Sbjct 1258 TCCTTCAGCTGATCCACGCCCTGTCCAACGTAGTTATCCTT---ACATGTGCCATAGGGG 1202 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467 |||||||| || | ||| || || |||||||| || || | || || || |||| || Sbjct 1201 GCTCCAAAGTGACGCCACTGAAAGCCATAAACTGGCCCCAAATCACCCTCCTCTCGCTCC 1142 Query 97468 CAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACA--- 97524 ||| || | ||| | | ||| | | || ||| ||| || | || Sbjct 1141 GTGAATCCCATTGAATCCAGGAACTCCCTTGTACTGTTCCCATTCCAGAT---CCCAATG 1085 Query 97525 -CCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTC 97583 | |||||||| |||||| |||||| || || ||||| ||||| | |||||| || Sbjct 1084 TTCTTCTGCTGCAATTCCTTTGC-GTCAGTTGAACCCCTGATGAACCAGATCAATTCCTC 1026 Query 97584 CACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | ||||||| |||||| |||||||| || || | ||| || || Sbjct 1025 AGCTACACCTCGCCAAAACACTCTCTTGGTGGTCAGGAGCGGGAA 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346332507388820