Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq186 102 1e-16 >seq186 Length=148488 Score = 102 bits (112), Expect = 1e-16 Identities = 163/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || || || || ||| | || ||||| || | Sbjct 13854 ATGCAAATTTTCGTTAAAACTCTGACCGGAAAGACAATTACTCTGGAAGTTGAACCATCT 13913 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | ||| || ||||| ||||||||||| || || || || || Sbjct 13914 GATACAATTGAAAATGTCAAAGCCAAGATTCAGGATAAAGAAGGAATTCCTCCAGACCAG 13973 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || |||||| | |||||| | || || | || || || Sbjct 13974 CAACGTTTGATTTTTGCTGGGAAACAACTTGAGGATGGCCGTACCCTTTCGGACTACAAC 14033 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTA 124770 || || || |||||||| | ||| | || | ||| | || ||||| ||||| Sbjct 14034 ATCCAGAAGGAATCAACCCTTCATCTTGTGCTGCGTCTTCGTGGTGGATATTA 14086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754447220716800