Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq186 91.5 2e-13 seq60870 86.0 9e-12 seq7722 86.0 9e-12 >seq186 Length=148488 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 |||||| | ||| | | || | ||| | || ||||| || || || || || || Sbjct 14081 TCCACCACGAAGACGCAGCACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCCGA 14022 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || | || ||| || | |||||| |||||||||||||| | |||||| || ||||| Sbjct 14021 AAGGGTACGGCCATCCTCAAGTTGTTTCCCAGCAAAAATCAAACGTTGCTGGTCTGGAGG 13962 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||||||||| || Sbjct 13961 AATTCCTTCTTTATCCTG 13944 >seq60870 Length=785 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| ||||| ||||| || | | ||| |||||||| |||||||||||||| || | | Sbjct 703 ATATTGTAATCAGAAAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATTAAACGT 644 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| || || || || |||||||| || Sbjct 643 TGCTGATCTGGTGGGATGCCCTCTTTATCCTG 612 >seq7722 Length=1803 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| ||||| ||||| || | | ||| |||||||| |||||||||||||| || | | Sbjct 98 ATATTGTAATCAGAAAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATTAAACGT 39 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| || || || || |||||||| || Sbjct 38 TGCTGATCTGGTGGGATGCCCTCTTTATCCTG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742533550609920