Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7333 131 1e-25 >seq7333 Length=2231 Score = 131 bits (144), Expect = 1e-25 Identities = 351/533 (66%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 ||||| |||||||| || || ||||| ||||| ||| | || |||||||| |||| Sbjct 1152 GAGGGTGATTTGGGGCCAGTTTATGGCTTTCAGTGGCGTCACTTTGGAGCCCCCTATGGC 1211 Query 20275 GACATGAACACA-AATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 ||||| | | || || ||||||| || || ||||| | | | || ||| | Sbjct 1212 -ACATGTAAGGATAACTACGTTGGACAGGGCGTGGATCAGCTGAAGGAGGTGATTCAGCG 1270 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 || ||| ||||| || | | ||||| | |||| ||||| || ||| | Sbjct 1271 CATCCGGGAGAAGCCAAATGATCGGCGGATTATCATGAGCGCATGGAATCCTGTGGATTT 1330 Query 20394 GCCTTTAATGGCTTTGCCT-CCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 || ||||||| | || || ||||| || || |||||||| || ||| | Sbjct 1331 ACCCATAATGGCACTACCCACCCTGTCACTGCCTCGTGCAGTTTTACGTGGCCAATGGGG 1390 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 || | || || || |||||||||||||| || |||||||| |||||||||| ||||| | Sbjct 1391 AACTCTCCTGCCAGATGTATCAACGATCGGCAGATATGGGCTTGGGTGTTCCATTCAACA 1450 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 |||| || || || || || || || || || || | || ||| | || | || | Sbjct 1451 TTGCCAGCTACGCCCTTCTCACTCGAATCATCGCCCACATAACTGATCTCAAGCCTGGGG 1510 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632 | || |||||||| | ||||| || ||| | || || ||||| | || ||| | ||| Sbjct 1511 ATTTTGTCCACACTCTGGGAGATGCTCATGTCTATCTAAATCACGTTGAGCCTCTGAAAG 1570 Query 20633 TACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAG 20692 || | ||| | ||||| | |||||||| || || |||| | || | | Sbjct 1571 AGCAACTCCTACGTCGCCCAAAGCCCTTCCCAACGCTCAAGTTTTCTCGGAAGGTGACTG 1630 Query 20693 ATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCAT 20745 | ||| | || || || || ||||||||| | | | || ||||||||| Sbjct 1631 ACATTGAGGACTTCAAGTTCGAGGATTTTGTGCTGAATGACTACAATCCCCAT 1683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398664285634570