Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4578 87.8 4e-12 >seq4578 Length=10518 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 249580 GAGACAGGGGGGCCGTATTATTTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGG 249639 || || ||| |||||| |||| |||||| ||||||||| |||||||| || | | Sbjct 4270 GAAACTGGGACGCCGTACATGTTGTACAAAGATGCGTGCAACAGGAAGAGTAATCAGCAG 4211 Query 249640 CATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAG 249699 || |||| || || |||| ||| | || |||| | | |||| ||||||||| Sbjct 4210 AATATTGGGACAATTCGCTGTAGCAATTTGTGCACAGAAATTGTAGAATATTCGTCCAAG 4151 Query 249700 GAGGAGATTGCCGTCTGCAACCTGGCAAGCATCAATCTCGTGAGGCACGTGAGGGCGGAC 249759 || |||||||| || ||||| |||||| || |||| | | ||| | ||| || Sbjct 4150 GATGAGATTGCTGTGTGCAATCTGGCATCTATTGCTCTCAATATGTTCGTAAAGGCTGAT 4091 Query 249760 AGGACGTTCGACTTCGAG 249777 | ||||| |||||| ||| Sbjct 4090 AAGACGTACGACTTTGAG 4073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072296727203968