Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7333 141 8e-29 >seq7333 Length=2231 Score = 141 bits (156), Expect = 8e-29 Identities = 474/730 (65%), Gaps = 11/730 (2%) Strand=Plus/Minus Query 20773 GTGCTCAAACGGCCATCTCCATCTCTATGTGGGGATGGGGGTCGTAGCCCTCGAGACTCA 20832 ||||| |||| |||||||||||| | || | ||||||||| | |||| | | || | Sbjct 1717 GTGCTTAAACTGCCATCTCCATCGCGATCTTGGGATGGGGATTGTAGTCATTCAGCACAA 1658 Query 20833 GATCCGCGCGCGTAAAGTCCTCCAGACGCGCCACCTTTCTCAAAATCTTCAGCCGCGGAA 20892 |||| || | | |||||||| | | |||||| | ||| ||| ||| || | Sbjct 1657 AATCCTCGAACTTGAAGTCCTCAATGTCAGTCACCTTCCGAGAAAACTTGAGCGTTGGGA 1598 Query 20893 ACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGT 20952 | || ||| | | || || ||| || |||||||| || || || | Sbjct 1597 AGGGCTTTGGGCGACGTAGGAGTTGCTCTTTCAGAGGCTCAACGTGATTTAGATAGACAT 1538 Query 20953 GGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCA 21012 | || || |||| ||||| ||||| || || || | || | || | ||| ||||| Sbjct 1537 GAGCATCTCCCAGAGTGTGGACAAAATCCCCAGGCTTGAGATCAGTTATGTGGGCGAT-- 1480 Query 21013 GATACG--TCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGC 21070 ||| || | || |||||||||||||| ||||| || || || || | |||||| || || Sbjct 1479 GATTCGAGTGAGAAGGGCGTAGCTGGCAATGTTGAATGGAACACCCAAGCCCATATCTGC 1420 Query 21071 GGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAAC 21130 || | || |||| ||||||||| || ||||| |||||||||||||| ||| | | Sbjct 1419 CGATCGTTGATACATCTGGCAGGAGAGTTCCCCATTGGCCACGTAAAACTG-CACGAGGC 1361 Query 21131 -GTGACAAGGAGGG-AGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACG 21188 |||||| || ||| || ||||| | | ||| | || ||||| |||| ||| | Sbjct 1360 AGTGACAGGGTGGGTAGTGCCATTATGGGTAAATCCACAGGATTCCATGCGCTCATGATA 1301 Query 21189 ATGCGCCGATCGTGGGGC--CGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCA 21246 || |||||||| | ||| | || | || | | | ||| | |||||| |||| Sbjct 1300 ATCCGCCGATCATTTGGCTTCTCCCG--GATGCGCTGAATCACCTCCTTCAGCTGATCCA 1243 Query 21247 CCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACT 21306 | ||||| || ||||||| | | | || || ||||| || | ||||| Sbjct 1242 CGCCCTGTCCAACGTAGTTATCCTTACATGTGCCATAGGGGGCTCCAAAGTGACGCCACT 1183 Query 21307 GGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCGCCA 21366 | || || || || ||||||| ||| ||||| || ||| ||| ||| | ||| Sbjct 1182 GAAAGCCATAAACTGGCCCCAAATCACCCTCCTCTCGCTCCGTGAATCCCATTGAATCCA 1123 Query 21367 AAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGACAGTTCGGTGG 21426 || | | | | || | | | ||| || | | || || ||| | | Sbjct 1122 GGAACTCCCTTGTACTGTTCCCATTCCAGATCCCAATGTTCTTCTGCTGCAATTCCTTTG 1063 Query 21427 AGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCC 21486 ||| || || |||||||| ||||| | ||| ||||| | || || | ||||||||| | Sbjct 1062 CGTCAGTTGAACCCCTGATGAACCAGATCAATTCCTCAGCTACACCTCGCCAAAACACTC 1003 Query 21487 TTTTGGTGGT 21496 | |||||||| Sbjct 1002 TCTTGGTGGT 993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427219060512480