Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 2e-11 >seq18 Length=974545 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 18850 CTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATA 18909 |||||| || ||||||||||||| || ||| | | ||||| ||||| || || ||| | Sbjct 449638 CTCCTTCTGGATATTGTAATCCGACAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAA 449579 Query 18910 AATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTG 18969 || | | |||||||||| || | ||||| ||||| ||| || ||| || | Sbjct 449578 GATCAAACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 449519 Query 18970 GCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGAC 19029 | | ||||| || ||| || | ||| |||||||| || || | ||| || || Sbjct 449518 TTCAATGGTATCTGAGGGTTCCACCTCCAAGGTGATGGTTTTCCCCGTAAGAGTCTTCAC 449459 Query 19030 AAAAATTTGCATTTTAAATCT 19050 ||| || |||||||| || || Sbjct 449458 AAAGATCTGCATTTTGAAGCT 449438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414033050311444