Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq7333 105 5e-18 >seq7333 Length=2231 Score = 105 bits (116), Expect = 5e-18 Identities = 206/299 (69%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCT 25481 ||||| || || ||||||| || ||||| ||||| |||||||||||||||||||| || Sbjct 1568 TTCAGAGGCTCAACGTGATTTAGATAGACATGAGCATCTCCCAGAGTGTGGACAAAATCC 1509 Query 25482 CCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATG 25541 || || | || | || | || || || || ||||| || ||||||||| ||| Sbjct 1508 CCAGGCTTGAGATCAGTTATGTGGGCGATGATTCGAGTGAGAAGGGCGTAGCTGGCAATG 1449 Query 25542 TTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 25601 || || || || || || ||||| | | |||| | || || | ||| || ||||| || Sbjct 1448 TTGAATGGAACACCCAAGCCCATAT-CTGCCGATCGTTGATACATCTGGCAGGAGAGTTC 1390 Query 25602 TTCGTCGCTCACGTAAAACTGACAC-ATGGTGTAGCACGG-AGGAAGAGCTATAAGGCCC 25659 | | | |||||||||||| ||| | | || || || || || || || | | Sbjct 1389 CCCATTGGCCACGTAAAACTG-CACGAGGCAGTGACAGGGTGGGTAGTGCCATTATGGGT 1331 Query 25660 AAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGAT 25718 || || ||| ||||| |||| || ||| || | || || | ||| || |||| ||| Sbjct 1330 AAATCCACAGGATTCCATGCGCTCATGATAATCCGCCGATCATTTGGCTTCTCCCGGAT 1272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339694760615298