Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq73 114 2e-20 >seq73 Length=410114 Score = 114 bits (126), Expect = 2e-20 Identities = 195/279 (70%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 193888 TGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTG 193947 ||||||| | ||||||| | ||| || || || | |||||| | || || || Sbjct 174391 TGTATGGATTTTGGATCGTTGTGAACTACCGGGAAGCCTATGGAATGTTTGCCTGTAATG 174332 Query 193948 GTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTA 194007 | || ||||||||||| || |||||| | |||| || | ||||| || |||||||||| Sbjct 174331 GGATCCTCTTCAATCATGAGTCTCCACGTCGAGGAGAAAACTTTGTCACGCGTAAGATTA 174272 Query 194008 CACAAGGTTTATCTAAGATCTCTGTTGGATTACA--GAAGATTCTTTATCTTGGTAATCT 194065 | | | | || | ||||||||| |||| | | | ||| ||| || | || || ||||| Sbjct 174271 CCCGATCTGTAGCCAAGATCTCT-TTGGGTCAAATGGAAAATT-TTGAACTCGGCAATCT 174214 Query 194066 TAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTT 194125 || | | || |||||||| || || || || || |||||||||||| | ||||| Sbjct 174213 CGATTCCCGACGTGACTGGGGACATGCTAAAGACTACGTAGAAGCGATGTGGCTTATGTT 174154 Query 194126 GCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164 ||| | || ||| | ||||| || ||||| || || Sbjct 174153 GCAGCGTGAAACGCCCCAGGATTACGTAATTGCAACTGG 174115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 806476851352560