Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4578 161 3e-34 seq26202 91.5 4e-13 seq2745 86.0 2e-11 >seq4578 Length=10518 Score = 161 bits (178), Expect = 3e-34 Identities = 551/853 (65%), Gaps = 7/853 (1%) Strand=Plus/Minus Query 363643 GGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGT 363702 || |||| || || || ||| | |||||||| || || ||| ||| || |||||||| Sbjct 8104 GGAATCTACGATACCCTGAAGCAATGTGCTCTGATCTCAAAGGCTGCCGGAGGAATTGGC 8045 Query 363703 GTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCG 363762 || || ||| ||||||| | | |||| | ||| |||||| || ||| Sbjct 8044 GTGAATATGCACTGCATTCGTGCTCGGGGCAGTCATATTGCCGGCACCAATGGCACCTCC 7985 Query 363763 AATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGT 363822 ||||| || || || ||||||||||| | ||| || || | ||||| || |||||| Sbjct 7984 AATGGCCTTGTCCCAATGCTTCGTGTCTACAACACAACAGCCTGCTACGTTGATCAGGGT 7925 Query 363823 GGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTT 363882 || ||||| || || |||||||| || || ||||| || | || || ||| Sbjct 7924 GGGAACAAGCGTCCCGGTGCCTTTGCTATCTACCTGGAGCCCTGGCACGGTGACATCTTT 7865 Query 363883 GAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTC 363942 |||||| | || ||| ||| || ||||| || ||| | || ||| | ||||||||| Sbjct 7864 GAGTTTTTGGATCTCAAGAAGAATACGGGCAAGGAGAAGGCACGAGCAAGGGATCTGTTC 7805 Query 363943 TATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCA 364002 ||||| || ||| | | || | |||||| || | || | || | | | ||| Sbjct 7804 TATGCTCTGTGGATCCCGGATCTGTTTATGCAGAGAGTATCTGAAGATGGGGAATGGAGT 7745 Query 364003 CTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCT 364062 | | || || | | ||||||| | | ||| |||||||| | | || Sbjct 7744 TTGATGTGTCCGAATCAGAGTCCAGGATTGTTTGATTGCTGGGGTGAGAAATTCAATGAA 7685 Query 364063 CTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGC-ACAGAAGCT 364121 | ||| |||||||| ||| || | | | | || |||||| || | || | || Sbjct 7684 TTGTACATGAAGTATGAGAAGGAAGGTAGGTATATCAGGAGAATTCCTGCGAGAG-ATCT 7626 Query 364122 ATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGA 364181 ||||||||||| || | || | || || || || || || |||||||||||||| Sbjct 7625 CTGGTTTGCCATAATTCAGAGTCAAGTGGAAACTGGGACGCCGTACATGTTGTACAAAGA 7566 Query 364182 TTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTAT 364240 | |||||||| | ||| ||| |||||| | |||| ||||||| || | ||||| | | Sbjct 7565 TGCGTGCAACAGGAAGAGCAATCAGCAGAATATTGGGACAATTC-GCTGTAGCAATTTGT 7507 Query 364241 GTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGA 364300 | || || ||| | ||||| | | || |||| ||| || || || || || || | Sbjct 7506 GCACAGAAATTGTAGAATATTCGTCCAAGGATGAGATTGCTGTGTGCAATCTGGCATCTA 7447 Query 364301 TCGCGCTTCCGGCGTTTGTAAAAGATGGT---ACTTTTGACCACCAGCATCTTTATGACG 364357 | || || ||| ||||| | || | || | || || | || | | | Sbjct 7446 TTGCTCTCAATATGTTCGTAAAGGCTGATAAGACGTACGATTTTGAGAAACTCAAAGCAG 7387 Query 364358 TAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTC 364417 | || | || ||| ||||| | |||| || ||||||| || || ||||| | | Sbjct 7386 TGACGAAGATTGTTACGCGCAATTTGAACAAAGTCATCGACATCAACTACTATCCCGTAC 7327 Query 364418 CTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 | || ||| | || |||||| | || | || ||||| |||| || ||||| || | Sbjct 7326 CAGAGGCCAAATTGTCCAATATGAGGCACAGGCCAATTGGGATTGGGGTTCAGGGTCTGG 7267 Query 364478 CTGACGTTTTTAT 364490 | || | ||| || Sbjct 7266 CGGATGCTTTCAT 7254 Score = 131 bits (144), Expect = 4e-25 Identities = 461/717 (64%), Gaps = 5/717 (1%) Strand=Plus/Minus Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837 ||||||||||| | ||| || || | ||||| || || ||||| ||||| Sbjct 4642 ATGCTTCGTGTCTACAACACGACAGCCTGCTACGTTGATCAAGGTGGGAACAAGCGTCCC 4583 Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || |||||||| || || ||||| || | || |||||||||||| | || ||| Sbjct 4582 GGTGCCTTTGCTATCTACCTGGAGCCCTGGCACGGTGACATTTTTGAGTTTTTGGATCTC 4523 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| |||||||| || ||| | || ||| | |||||||||||||| || ||| | Sbjct 4522 AAGAAGAACACGGGCAAGGAGAAGGCACGAGCAAGGGATCTGTTCTATGCTCTGTGGATC 4463 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 | || | |||||| || | || | || | | | ||| | | || || | Sbjct 4462 CCGGATCTGTTTATGCAGAGAGTATCTGAAGATGGGGAATGGAGTTTGATGTGTCCGAAT 4403 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 | ||||||| | | ||| |||||||| | | || | ||| |||||| Sbjct 4402 CAGAGTCCAGGATTATTTGATTGCTGGGGTGAGAAGTTCAATGAATTGTACATGAAGTAT 4343 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 || ||| || | | | | || |||||| || | | || ||||||||||| || Sbjct 4342 GAGAAGGAAGGTAGGTATATCAGGAGAATTCCTGCGAGGGATCTCTGGTTTGCCATAATT 4283 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 | || | || || || || || || ||||||||||||||| |||||||| | ||| Sbjct 4282 CAGAGTCAAGTGGAAACTGGGACGCCGTACATGTTGTACAAAGATGCGTGCAACAGGAAG 4223 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGA 364256 || |||||| | |||| ||||||| || | ||||| | || || || ||| | || Sbjct 4222 AGTAATCAGCAGAATATTGGGACAATTC-GCTGTAGCAATTTGTGCACAGAAATTGTAGA 4164 Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316 ||| | | || |||| ||| || || || || || || || || || ||| Sbjct 4163 ATATTCGTCCAAGGATGAGATTGCTGTGTGCAATCTGGCATCTATTGCTCTCAATATGTT 4104 Query 364317 TGTAAAAGATGGT---ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 ||||| | || | || | ||| || | || | | ||||| | || ||| Sbjct 4103 CGTAAAGGCTGATAAGACGTACGACTTTGAGAAACTCAAAGCAGTAACGAAGATTGTTAC 4044 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 ||||| | |||| || ||||||| || || ||||| | || || ||| | || Sbjct 4043 GCGCAATTTGAACAAAGTCATCGACATCAACTACTATCCCGTGCCAGAGGCCAAATTGTC 3984 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 |||||| | || | || ||||| |||| || ||||| || || || | ||| || Sbjct 3983 CAATATGAGACACAGGCCAATTGGGATTGGGGTTCAGGGTCTAGCGGATGCTTTCAT 3927 >seq26202 Length=13276 Score = 91.5 bits (100), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGA--ACGTTCA-TTCGCGGAA 22491 ||||| |||||||||||||| ||| | ||||| || | | | | | | || | |||| Sbjct 1246 AAGAAGAAGGCAGATTGGGCTCTGCAGTGGATTGCCAGTCAGGAAGCTAACTTTGGGGAA 1305 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 ||| | ||||| ||||| | ||||| |||||||||||| ||| || | ||||| Sbjct 1306 CGTGTGATTGCCTTTGCAGCTGTTGAGGGCATTTTCTTTAGCGGAAGCTTCGCTTCAATC 1365 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 || ||||| ||| ||||| || ||||| || || || || || || ||| | || Sbjct 1366 TTCTGGCTCAAATCACGTGGCATCATGCCCGGACTCACATTCTCGAACGAGCTGATCTCT 1425 Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647 || ||||| ||| | || || ||||| ||| || Sbjct 1426 CGCGATGAAGGTTTGCACTGTGACTTTGCCTGTTTG 1461 >seq2745 Length=20976 Score = 86.0 bits (94), Expect = 2e-11 Identities = 123/171 (72%), Gaps = 3/171 (2%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGA--ACGTTCA-TTCGCGGAA 22491 ||||| |||||||||||||| ||| | ||||| || | | | | | | || | |||| Sbjct 3970 AAGAAGAAGGCAGATTGGGCTCTGCAGTGGATTGCCAGTCAGGAAGCTAACTTTGGGGAA 4029 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 ||| | ||||| ||||| | ||||| ||||||||||| ||| || | ||||| Sbjct 4030 CGTGTGATTGCCTTTGCAGCTGTTGAGGGCATTTTCTTCAGCGGAAGCTTCGCTTCAATC 4089 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602 || ||||| ||| ||||| || ||||| || || || || ||||| ||| Sbjct 4090 TTCTGGCTCAAATCACGTGGCATCATGCCCGGACTCACATTCTCAAACGAG 4140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301569689337932