Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq186 82.4 6e-11 >seq186 Length=148488 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||||||||| || || ||||| ||||| ||| | ||| || ||| Sbjct 13171 AATGCAAATTTTTGTCAAAACCCTTACCGGAAAGACCATCACCCTTGAAGTTGA-ACCAT 13229 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| | || || || || ||||| || || ||||| || | Sbjct 13230 CTGACACCATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAGGGTATCCCCCCAGACC 13289 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || |||| || ||||| || | || |||| ||| || |||| || | Sbjct 13290 AGCAACGTCTCATTTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACCTTGTCCGACTACA 13349 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 |||| || || |||||||| | ||| |||| || Sbjct 13350 ACATCCAGAAGGAGTCTACCCTTCATTTGGTCTT 13383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424790226835120