Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4578 159 3e-34 seq83690 114 1e-20 seq186 109 5e-19 seq18 109 5e-19 >seq4578 Length=10518 Score = 159 bits (176), Expect = 3e-34 Identities = 478/728 (66%), Gaps = 15/728 (2%) Strand=Plus/Plus Query 145064 ACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCAAAA 145123 ||||| || || |||| | || || || |||| ||| || ||| ||||||| || Sbjct 3558 ACCTGGAATTCACCGGAGAGTACTCGCCGGTTGTACATGTTGGATGTGTAGGGTTCGAAG 3617 Query 145124 GACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAATAAT 145183 || || |||||||| || || || || || | || || ||||| || |||| || Sbjct 3618 GATTCATTATTGCCTAGAATCTGGGCCGTTGAAGCTGTTGGCATTGGGGCAACCAGCAAC 3677 Query 145184 GAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAA 145243 ||||| | || || || | || | | |||||||| | |||||| ||| | Sbjct 3678 GAATTCCTCACACCATGTTGGGCAATTTTTGCCTTTAGCTCATCCCAATTCCACAAATCC 3737 Query 145244 GTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGA 145303 || || || ||||||||| |||||||| | || |||| ||| | || | ||| Sbjct 3738 GTTGGTTTCTTGTCCCACATCTCGTACTGAAGGATACCCTTGCTCACTGGACATCCTGCG 3797 Query 145304 AAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAGCGCCGA 145361 | | ||| | ||||| || || | |||||||| ||||||| || || Sbjct 3798 TACGTCTCGTAG--GGTCCAAGCTTCTCAGCCAATTCGCAACTGGCCTCCAAGGCACCAT 3855 Query 145362 AATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCA 145421 | || || |||||| |||||| ||||| | | || || ||||| || || |||| Sbjct 3856 AGTAGATGGTCTCGAAGATTTGCTGATTGAGTTTCTTGGCCTCTTCGCTATCATAGGGCA 3915 Query 145422 TGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTT 145481 |||| || | |||||||| || || ||||| | || | || || |||| ||| Sbjct 3916 GACGCATCAAAATGAAAGCATCCGCTAGACCCTGAACCCCAATCCCAATTGGCCTGTGTC 3975 Query 145482 TCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATTTTATTC 145540 |||| ||| || | ||| || | | ||||| || |||||| | ||| ||| Sbjct 3976 TCATATTGGACAATTTGGCCT-CTGGCACGGGATAGTAGTTGATGTCGATGACTTTGTTC 4034 Query 145541 AAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTT-TCAAAGTCAAACCGAGCCTC 145599 || || ||| || | ||| || | ||| | ||| |||||||| || | || Sbjct 4035 AAATTGCGCGTAACAATCTTCGTTAC-TGCTTTGAGTTTCTCAAAGTCGTAC---GTCTT 4090 Query 145600 GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTC 145659 ||| | || | |||||| || || || |||| ||| || || || |||| || Sbjct 4091 ATCAGCCTTTACGAACATATTGAGAGCAATAGATGCCAGATTGCACACAGCAATCTCATC 4150 Query 145660 GGCGTCGCTG--TATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717 | | | | |||| ||| || || | ||||||||||||||| || || || | | Sbjct 4151 --CTTGGACGAATATTCTACAATTTCTGTGCACAAATTGCTACAGCGAATTGTCCCAATA 4208 Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777 || ||||||||||| |||||||||||||| || ||||| | ||||||||| ||||| Sbjct 4209 TTCTGCTGATTACTCTTCCTGTTGCACGCATCTTTGTACAACATGTACGGCGTCCCAGTT 4268 Query 145778 TCCACCTG 145785 ||||| || Sbjct 4269 TCCACTTG 4276 Score = 150 bits (166), Expect = 2e-31 Identities = 476/728 (65%), Gaps = 15/728 (2%) Strand=Plus/Plus Query 145064 ACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCAAAA 145123 ||||| || || |||| | || || || |||| ||| || ||| ||||||| || Sbjct 6885 ACCTGGAATTCACCGGAGAGTACTCGGCGGTTGTACATGTTGGATGTGTAGGGTTCGAAG 6944 Query 145124 GACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAATAAT 145183 || || |||||||| || || || || || | || || ||||| || |||| || Sbjct 6945 GATTCATTATTGCCTAGAATCTGGGCCGTTGAAGCTGTTGGCATTGGGGCAACCAGCAAC 7004 Query 145184 GAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAA 145243 ||||| | || ||| || | || | | |||||| | | |||||| ||| | Sbjct 7005 GAATTCCTCACGCCATGTTGGGCAATTTTTGCCTTTAACTCATCCCAATTCCACAAATCC 7064 Query 145244 GTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGA 145303 || || || ||||||| |||||||||| || |||| ||| | || | ||| Sbjct 7065 GTTGGTTTCTTTCCCCACATTTCGTACTGCAGGATACCCTTGCTCACTGGACATCCTGCG 7124 Query 145304 AAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAGCGCCGA 145361 | | ||| | ||||| || || | |||||||| ||||||| || ||| Sbjct 7125 TATGTCTCGTAG--GGTCCAAGCTTCTCAGCCAATTCGCAACTTGCCTCCAAGGCACCGT 7182 Query 145362 AATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCA 145421 | || || |||||| |||||| ||||| | | ||||| ||||| || || |||| Sbjct 7183 AGTAGATGGTCTCGAAGATTTGCTGATTGAGTTTCTTGGCTTCTTCGCTGTCATAGGGCA 7242 Query 145422 TGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTT 145481 |||| || | |||||||| || || ||||| | || | || || |||| || Sbjct 7243 GACGCATCAAAATGAAAGCATCCGCCAGACCCTGAACCCCAATCCCAATTGGCCTGTGCC 7302 Query 145482 TCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATTTTATTC 145540 |||| ||| || | ||| || | | ||||| || |||||| | ||| ||| Sbjct 7303 TCATATTGGACAATTTGGCCT-CTGGTACGGGATAGTAGTTGATGTCGATGACTTTGTTC 7361 Query 145541 AAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTT-TCAAAGTCAAACCGAGCCTC 145599 || || ||| || | ||| || | ||| | ||| ||||| || || | || Sbjct 7362 AAATTGCGCGTAACAATCTTCGTCAC-TGCTTTGAGTTTCTCAAAATCGTAC---GTCTT 7417 Query 145600 GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTC 145659 ||| | || | |||||| || || || |||| ||| || || || |||| || Sbjct 7418 ATCAGCCTTTACGAACATATTGAGAGCAATAGATGCCAGATTGCACACAGCAATCTCATC 7477 Query 145660 GGCGTCGCTG--TATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717 | | | | |||| ||| || || | ||||||||||||||| || || || | | Sbjct 7478 --CTTGGACGAATATTCTACAATTTCTGTGCACAAATTGCTACAGCGAATTGTCCCAATA 7535 Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777 || |||||||| || |||||||||||||| || ||||| | ||||||||| ||||| Sbjct 7536 TTCTGCTGATTGCTCTTCCTGTTGCACGCATCTTTGTACAACATGTACGGCGTCCCAGTT 7595 Query 145778 TCCACCTG 145785 ||||| || Sbjct 7596 TCCACTTG 7603 >seq83690 Length=433 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || || ||||||||||||||||| || Sbjct 252 CCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCCGAA 193 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||||| || ||| |||| | |||||||||||| |||||| Sbjct 192 AGAGTACGGCCATCTTCCAATTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGG 133 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | ||| | |||||||| | |||| Sbjct 132 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATAGTATCGGAAGGTTCGACC 73 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| || || || || || || || || ||||||||| || Sbjct 72 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 22 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || || ||||| || || |||| |||||||||||||| |||||||||||||| ||| Sbjct 407 TCTTCAAGTTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGAGGGATTCCTTCCTTG 348 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||||| ||||| | ||| | || || | || ||| | |||| |||| | Sbjct 347 TCCTGAATTTTAGCCTTGACATTCTCAATGGTGTCAGAGGGCTCAACTTCGAGAGTAATG 288 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| || || || || || |||||||| Sbjct 287 GTCTT-CCGGTAAGGGTCTTGACAAAGATCTGCAT 254 >seq186 Length=148488 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| | || ||||| | ||| |||||||| || |||||||| ||| Sbjct 13399 GCCTCCACGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 13340 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||||||||| ||| | || | ||| |||||||| || || Sbjct 13339 CAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGGGG 13280 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || ||| || ||||| | ||| | || || | | || | Sbjct 13279 GATACCCTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATGGTGTCAGATGGTTCAAC 13220 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || ||||| || ||||| ||||| Sbjct 13219 TTCAAGGGTGATGGTCTTTCCGGTAAGGGTTTTGACAAAAATTTGCAT 13172 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | ||| | ||| || ||||| || |||||||| || Sbjct 14080 CCACCACGAAGACGCAGCACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCCGAA 14021 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || || || || || | || ||||| |||||||| ||||| Sbjct 14020 AGGGTACGGCCATCCTCAAGTTGTTTCCCAGCAAAAATCAAACGTTGCTGGTCTGGAGGA 13961 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || ||| | | || |||| | || | ||||| | | || | Sbjct 13960 ATTCCTTCTTTATC-CTGAATCTTGGCTTTGACATTTTCAATTGTATCAGATGGTTCAAC 13902 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| || || ||||| |||||||| |||||||| |||||| Sbjct 13901 TTCCAGAGTAATTGTCTTTCCGGTCAGAGTTTTAACGAAAATTTGCATG 13853 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| | ||| | || | ||| |||||||| || |||||||| || Sbjct 13853 GCCACCTCTGAGACGTAACACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGA 13794 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || || || | ||| || || || |||| ||||||||||| || || || Sbjct 13793 GAGAGTACGGCCATCTTCCAACTGTTTCCCGGCAAAGATCAAACGCTGCTGATCTGGTGG 13734 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||||| | ||| | ||| || | || ||| | Sbjct 13733 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGAGGGCTCAAC 13674 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || || || || || || |||||||| Sbjct 13673 TTCGAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 13626 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | ||| |||||||| ||||||||||| || Sbjct 13170 CCACCACGGAGACGCAAGACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAA 13111 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || || |||||||| || | || | |||||||||||| || || Sbjct 13110 AGGGTACGACCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGGGGA 13051 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||| | | ||| | ||||| | || ||||| Sbjct 13050 ATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGGCTCGACC 12991 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| |||||||| | ||| || || || |||||||| Sbjct 12990 TCAAGAGTGATGGTCTTACCGGTCAAAGTCTTCACAAAGATCTGCAT 12944 >seq18 Length=974545 Score = 109 bits (120), Expect = 5e-19 Identities = 167/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| || | ||||| ||| | ||| | ||| |||||| || || |||||| Sbjct 449679 ATGATGCCACCACGGAGACGCAACACGAGATGCAGGGTGCTCTCCTTCTGGATATTGTAA 449620 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || || || || ||||| |||||||| || || |||| ||||||||||| ||| Sbjct 449619 TCCGACAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCC 449560 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGA 131180 ||||| ||||| || ||||| ||| | | ||| || | | || | ||||| | || Sbjct 449559 GGAGGAATTCCCTCCTTGTC-CTGAATCTTTGCTTTCACATTTTCAATGGTATCTGAGGG 449501 Query 131181 CTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| | |||||| || || ||||| || || || |||||||| Sbjct 449500 TTCCACCTCCAAGGTGATGGTTTTCCCCGTAAGAGTCTTCACAAAGATCTGCAT 449447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471382509507840